Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05677 and RBAM_034320
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:10
# Commandline: needle
# -asequence pep-align/BSNT_05677___rpoE.1.9828.seq
# -bsequence pep-align/RBAM_034320___rpoE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05677___rpoE-RBAM_034320___rpoE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05677___rpoE-RBAM_034320___rpoE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05677___rpoE
# 2: RBAM_034320___rpoE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 175
# Identity: 143/175 (81.7%)
# Similarity: 161/175 (92.0%)
# Gaps: 7/175 ( 4.0%)
# Score: 759.0
#
#
#=======================================
BSNT_05677___ 1 MGIKQYSQEELKEMALVEIAHELFEEHKKPVPFQELLNEIASLLGVKKEE 50
|.|||||||:||:|||||||||:|.||||||||||||||:.|||||.|||
RBAM_034320__ 1 MSIKQYSQEQLKQMALVEIAHEIFSEHKKPVPFQELLNEMISLLGVTKEE 50
BSNT_05677___ 51 LGDRIAQFYTDLNIDGRFLALSDQTWGLRSWYPYDQLDEETQPTVKAKKK 100
||||||||||||||||||:|||||||||||||||||||||||||||||||
RBAM_034320__ 51 LGDRIAQFYTDLNIDGRFIALSDQTWGLRSWYPYDQLDEETQPTVKAKKK 100
BSNT_05677___ 101 KAKKAVEEDLDLDEFEEIDEDDLDLDEVEEELDLEADDFDDEDLD-EDDD 149
||||.||||||||||||:||||:||||:||::|||||.|||||:| ||||
RBAM_034320__ 101 KAKKVVEEDLDLDEFEEVDEDDIDLDEIEEDIDLEADSFDDEDIDEEDDD 150
BSNT_05677___ 150 DLEIEEDIVDE-----DDEEEEIK- 168
:||||:::::| |||||:.|
RBAM_034320__ 151 ELEIEDEMIEEDEEDYDDEEEDRKD 175
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