Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05673 and RBAM_034290

See DNA alignment / Visit BSNT_05673 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:10
# Commandline: needle
#    -asequence pep-align/BSNT_05673___spo0F.1.9828.seq
#    -bsequence pep-align/RBAM_034290___spo0F.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05673___spo0F-RBAM_034290___spo0F.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05673___spo0F-RBAM_034290___spo0F.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05673___spo0F
# 2: RBAM_034290___spo0F
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 124
# Identity:     119/124 (96.0%)
# Similarity:   124/124 (100.0%)
# Gaps:           0/124 ( 0.0%)
# Score: 603.0
# 
#
#=======================================

BSNT_05673___      1 MMNEKILIVDDQYGIRILLNEVFNKEGYQTFQAANGLQALDIVTKERPDL     50
                     |||||||||||||||||||||||:||||||||||||:|||||||||||||
RBAM_034290__      1 MMNEKILIVDDQYGIRILLNEVFHKEGYQTFQAANGIQALDIVTKERPDL     50

BSNT_05673___     51 VLLDMKIPGMDGIEILKRMKVIDENIRVIIMTAYGELDMIQESKELGALT    100
                     ||||||||||||||||||||:|||:|||||||||||||||:|||||||||
RBAM_034290__     51 VLLDMKIPGMDGIEILKRMKMIDESIRVIIMTAYGELDMIKESKELGALT    100

BSNT_05673___    101 HFAKPFDIDEIRDAVKKYLPLKSN    124
                     ||||||||||||||||||||||||
RBAM_034290__    101 HFAKPFDIDEIRDAVKKYLPLKSN    124


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