Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05673 and RBAM_034290
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:10
# Commandline: needle
# -asequence dna-align/BSNT_05673___spo0F.1.9828.seq
# -bsequence dna-align/RBAM_034290___spo0F.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05673___spo0F-RBAM_034290___spo0F.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05673___spo0F-RBAM_034290___spo0F.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05673___spo0F
# 2: RBAM_034290___spo0F
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 375
# Identity: 309/375 (82.4%)
# Similarity: 309/375 (82.4%)
# Gaps: 0/375 ( 0.0%)
# Score: 1281.0
#
#
#=======================================
BSNT_05673___ 1 ATGATGAATGAAAAAATTTTAATCGTTGATGATCAATACGGCATTCGTAT 50
||||||||||||||.|||||||||||.|||||.||||||||.||.||.||
RBAM_034290__ 1 ATGATGAATGAAAAGATTTTAATCGTAGATGACCAATACGGTATACGCAT 50
BSNT_05673___ 51 TTTGCTAAATGAAGTGTTCAATAAAGAAGGCTACCAGACGTTTCAGGCTG 100
.|||||.|||||||||||..||||||||||.|||||||||||||||||.|
RBAM_034290__ 51 ATTGCTCAATGAAGTGTTTCATAAAGAAGGGTACCAGACGTTTCAGGCCG 100
BSNT_05673___ 101 CGAACGGCCTGCAGGCGCTTGACATTGTGACAAAAGAACGGCCCGACCTT 150
|.||||||.|.||||||||.|||||.||.||.||||||||||||||.||.
RBAM_034290__ 101 CCAACGGCATACAGGCGCTGGACATCGTAACGAAAGAACGGCCCGATCTC 150
BSNT_05673___ 151 GTGCTTTTGGACATGAAAATTCCCGGCATGGACGGAATCGAAATCTTAAA 200
||||||||.||.||||||||.|||||||||||||||||||||||..|.||
RBAM_034290__ 151 GTGCTTTTAGATATGAAAATCCCCGGCATGGACGGAATCGAAATTCTCAA 200
BSNT_05673___ 201 ACGGATGAAGGTCATTGACGAAAACATCCGGGTCATTATCATGACGGCAT 250
.||.||||||.|.|||||||||..||||||.||||||||||||||.||.|
RBAM_034290__ 201 GCGCATGAAGATGATTGACGAATCCATCCGCGTCATTATCATGACCGCTT 250
BSNT_05673___ 251 ACGGAGAGCTCGACATGATCCAAGAATCGAAGGAATTGGGCGCCCTGACG 300
|||||||.|||||.|||||..|.|||||.||.||..|.||.||.|||||.
RBAM_034290__ 251 ACGGAGAACTCGATATGATTAAGGAATCAAAAGAGCTCGGAGCGCTGACC 300
BSNT_05673___ 301 CACTTTGCCAAGCCGTTTGACATCGACGAAATCAGAGACGCCGTCAAAAA 350
||.|||||.||.||.||||||||.||.||.|||||||||||.||.|||||
RBAM_034290__ 301 CATTTTGCGAAACCTTTTGACATTGATGAGATCAGAGACGCGGTGAAAAA 350
BSNT_05673___ 351 ATATCTGCCCCTGAAGTCTAACTGA 375
||||.|.||.||.||.||.||.|.|
RBAM_034290__ 351 ATATTTACCTCTAAAATCGAATTAA 375
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