Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_05664 and RBAM_034250

See DNA alignment / Visit BSNT_05664 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:10
# Commandline: needle
#    -asequence pep-align/BSNT_05664___glpX.1.9828.seq
#    -bsequence pep-align/RBAM_034250___glpX.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05664___glpX-RBAM_034250___glpX.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05664___glpX-RBAM_034250___glpX.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05664___glpX
# 2: RBAM_034250___glpX
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 321
# Identity:     308/321 (96.0%)
# Similarity:   317/321 (98.8%)
# Gaps:           0/321 ( 0.0%)
# Score: 1560.0
# 
#
#=======================================

BSNT_05664___      1 MERSLSMELVRVTEAAALASARWMGRGKKDEADEAATSAMRDVFDTVPMK     50
                     |||||||||||||||||||||||||||||||||:||||||||||||||||
RBAM_034250__      1 MERSLSMELVRVTEAAALASARWMGRGKKDEADDAATSAMRDVFDTVPMK     50

BSNT_05664___     51 GTVVIGEGEMDEAPMLYIGEKLGNGYGPRVDVAVDPLEGTNILASGGWNA    100
                     ||||||||||||||||||||||||||||||||||||||||||:|||||||
RBAM_034250__     51 GTVVIGEGEMDEAPMLYIGEKLGNGYGPRVDVAVDPLEGTNIVASGGWNA    100

BSNT_05664___    101 LTVIAVADHGTLLNAPDMYMQKIAVGPEAVGCIDIEAPVIDNLKAVAKAK    150
                     ||||||||||||||||||||:|||||||||||||||||||||||||||||
RBAM_034250__    101 LTVIAVADHGTLLNAPDMYMEKIAVGPEAVGCIDIEAPVIDNLKAVAKAK    150

BSNT_05664___    151 NKDVEDVVATILNRERHEKIISELREAGARIKLINDGDVAGAINTAFDHT    200
                     |||:||||||||||:|||||||||||||||||||||||||||||||||||
RBAM_034250__    151 NKDIEDVVATILNRDRHEKIISELREAGARIKLINDGDVAGAINTAFDHT    200

BSNT_05664___    201 GVDILFGSGGAPEGVLSAVALKALGGEIIGKLLPQSEEEITRCHKMGLDL    250
                     ||||||||||||||||||||||||||||||:|||||.||..||.:||||:
RBAM_034250__    201 GVDILFGSGGAPEGVLSAVALKALGGEIIGRLLPQSAEEQARCERMGLDV    250

BSNT_05664___    251 SKVLRMEDLVKGDDAIFAATGVTDGELLKGVQFKGSVGTTESLVIRAKSG    300
                     ||||||||||:|||||||||||||||||||||||||||||||||||||||
RBAM_034250__    251 SKVLRMEDLVRGDDAIFAATGVTDGELLKGVQFKGSVGTTESLVIRAKSG    300

BSNT_05664___    301 TVRFVDGRHSLKKKPNLVIRP    321
                     |||||||||||||||||||||
RBAM_034250__    301 TVRFVDGRHSLKKKPNLVIRP    321


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.