Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05664 and RBAM_034250

See Amino acid alignment / Visit BSNT_05664 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:10
# Commandline: needle
#    -asequence dna-align/BSNT_05664___glpX.1.9828.seq
#    -bsequence dna-align/RBAM_034250___glpX.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05664___glpX-RBAM_034250___glpX.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05664___glpX-RBAM_034250___glpX.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05664___glpX
# 2: RBAM_034250___glpX
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 969
# Identity:     802/969 (82.8%)
# Similarity:   802/969 (82.8%)
# Gaps:           6/969 ( 0.6%)
# Score: 3325.0
# 
#
#=======================================

BSNT_05664___      1 ATGGAAAGAAGTTTATCAATGGAATTGGTACGTGTGACCGAAGCTGCGGC     50
                     |||||||||||.|||||.|||||||||||.||.||.||.|||||.|||||
RBAM_034250__      1 ATGGAAAGAAGCTTATCGATGGAATTGGTTCGAGTCACTGAAGCGGCGGC     50

BSNT_05664___     51 ATTGGCATCAGCAAGATGGATGGGCCGGGGAAAAAAAGATGAGGCTGATG    100
                     .||.|||||.||.||||||||||||||.||.|||||||||||.|||||||
RBAM_034250__     51 TTTAGCATCTGCCAGATGGATGGGCCGCGGGAAAAAAGATGAAGCTGATG    100

BSNT_05664___    101 AAGCGGCAACAAGTGCAATGAGAGACGTTTTTGATACAGTGCCGATGAAA    150
                     |.|||||.|||||.||||||.|.|||||.|||||.||.||||||||||||
RBAM_034250__    101 ATGCGGCGACAAGCGCAATGCGTGACGTGTTTGACACGGTGCCGATGAAA    150

BSNT_05664___    151 GGGACCGTTGTAATCGGTGAAGGGGAAATGGACGAAGCGCCGATGCTGTA    200
                     ||.||.||.||.|||||.|||||.||.|||||.||||||||||||||.||
RBAM_034250__    151 GGCACGGTCGTGATCGGGGAAGGCGAGATGGATGAAGCGCCGATGCTTTA    200

BSNT_05664___    201 TATCGGGGAAAAACTCGGAAACGGGTACGGCCCTCGCGTTGATGTCGCAG    250
                     .|||||.|||||.||.||||||||.||||||||.|||||.||||||||||
RBAM_034250__    201 CATCGGCGAAAAGCTGGGAAACGGATACGGCCCGCGCGTCGATGTCGCAG    250

BSNT_05664___    251 TTGACCCTCTTGAAGGCACAAACATCTTAGCAAGCGGCGGCTGGAACGCG    300
                     |.||.|||||||||||||||||||||.||||.||||||||||||||.|||
RBAM_034250__    251 TCGATCCTCTTGAAGGCACAAACATCGTAGCGAGCGGCGGCTGGAATGCG    300

BSNT_05664___    301 CTGACGGTGATCGCTGTCGCAGACCACGGCACTCTGCTGAATGCTCCTGA    350
                     ||||||||||||||.|||||.|||||.||.||.||||||||.||.||.||
RBAM_034250__    301 CTGACGGTGATCGCGGTCGCCGACCATGGAACACTGCTGAACGCCCCGGA    350

BSNT_05664___    351 CATGTATATGCAAAAAATCGCAGTCGGTCCGGAAGCGGTGGGCTGCATTG    400
                     .|||||||||.||||||||||.||||||||.||||||||.||||||||.|
RBAM_034250__    351 TATGTATATGGAAAAAATCGCGGTCGGTCCCGAAGCGGTAGGCTGCATCG    400

BSNT_05664___    401 ACATCGAAGCACCTGTCATTGACAACCTTAAAGCGGTGGCAAAAGCGAAA    450
                     |.||.|||||.|||||||||||.|||.|.|||||.||.||.|||||||||
RBAM_034250__    401 ATATTGAAGCGCCTGTCATTGATAACTTAAAAGCCGTTGCGAAAGCGAAA    450

BSNT_05664___    451 AACAAGGACGTTGAGGACGTCGTTGCCACAATTTTAAACCGTGAAAGACA    500
                     |||||.|||.||||.||.|||||.||.||.||||||||.|||||.|||||
RBAM_034250__    451 AACAAAGACATTGAAGATGTCGTGGCAACCATTTTAAATCGTGACAGACA    500

BSNT_05664___    501 CGAAAAAATCATTTCCGAGCTTCGTGAGGCCGGCGCCAGAATCAAATTGA    550
                     .|||||||||||.||.||..|.||||||||.|||||||||||||||.|||
RBAM_034250__    501 TGAAAAAATCATCTCTGAATTGCGTGAGGCGGGCGCCAGAATCAAACTGA    550

BSNT_05664___    551 TCAATGACGGCGATGTCGCAGGCGCCATCAACACGGCTTTCGACCACACG    600
                     ||||.|||||.||||||||.|||||||||||.|||||.||.|||||.|||
RBAM_034250__    551 TCAACGACGGTGATGTCGCGGGCGCCATCAATACGGCCTTTGACCATACG    600

BSNT_05664___    601 GGCGTTGATATCCTGTTCGGATCAGGCGGCGCTCCCGAGGGTGTGCTTTC    650
                     ||.||.||.||.||.|||||.||||||||.|||||.||.||.|||||.||
RBAM_034250__    601 GGAGTAGACATTCTCTTCGGTTCAGGCGGGGCTCCTGAAGGCGTGCTGTC    650

BSNT_05664___    651 CGCTGTTGCGCTAAAAGCACTCGGAGGAGAAATCATTGGTAAACTTCTTC    700
                     .||.||||||.|||||||.|||||.||.||||||||.||.|..|||||.|
RBAM_034250__    651 TGCCGTTGCGTTAAAAGCGCTCGGCGGCGAAATCATCGGCAGGCTTCTGC    700

BSNT_05664___    701 CGCAAAGCGAAGAAGAAATCA--CTCGCTGTCACAAAATGGGCCTTGATT    748
                     |||||||.|..||||  |.||  |.||||||.|...|||||||||||||.
RBAM_034250__    701 CGCAAAGTGCGGAAG--AGCAGGCCCGCTGTGAGCGAATGGGCCTTGATG    748

BSNT_05664___    749 TAAGCAAAGTCCTTCGCATGGAAGACCTTGTGA-AGGGTGATGACGCGAT    797
                     ||..||||||.||.||.|||||.|||||||||| |||| ||||||||.||
RBAM_034250__    749 TATCCAAAGTGCTCCGGATGGAGGACCTTGTGAGAGGG-GATGACGCCAT    797

BSNT_05664___    798 TTTTGCAGCTACAGGGGTTACTGACGGCGAGCTGTTAAAAGGAGTTCAAT    847
                     ||||||.||.||.||.||.||.|||||.||||||.|.|||||.|||||.|
RBAM_034250__    798 TTTTGCCGCAACGGGCGTCACGGACGGAGAGCTGCTGAAAGGCGTTCAGT    847

BSNT_05664___    848 TCAAAGGCTCTGTCGGTACAACTGAAAGCTTAGTTATCCGCGCAAAATCG    897
                     ||||||||||.|||||.||.||||||||..|.||.|||||.||.|||||.
RBAM_034250__    848 TCAAAGGCTCCGTCGGCACGACTGAAAGTCTGGTCATCCGGGCGAAATCA    897

BSNT_05664___    898 GGCACTGTTCGTTTCGTTGATGGCAGACACAGCTTGAAAAAGAAACCAAA    947
                     ||.||.||.||.||||||||.||.|||||||||.||||.||.||||||||
RBAM_034250__    898 GGAACGGTCCGATTCGTTGACGGAAGACACAGCCTGAAGAAAAAACCAAA    947

BSNT_05664___    948 TCTTGTAATCCGTCCATAA    966
                     ||||||.|||||.||||||
RBAM_034250__    948 TCTTGTGATCCGGCCATAA    966


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