Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05664 and RBAM_034250
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:10
# Commandline: needle
# -asequence dna-align/BSNT_05664___glpX.1.9828.seq
# -bsequence dna-align/RBAM_034250___glpX.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05664___glpX-RBAM_034250___glpX.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05664___glpX-RBAM_034250___glpX.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05664___glpX
# 2: RBAM_034250___glpX
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 969
# Identity: 802/969 (82.8%)
# Similarity: 802/969 (82.8%)
# Gaps: 6/969 ( 0.6%)
# Score: 3325.0
#
#
#=======================================
BSNT_05664___ 1 ATGGAAAGAAGTTTATCAATGGAATTGGTACGTGTGACCGAAGCTGCGGC 50
|||||||||||.|||||.|||||||||||.||.||.||.|||||.|||||
RBAM_034250__ 1 ATGGAAAGAAGCTTATCGATGGAATTGGTTCGAGTCACTGAAGCGGCGGC 50
BSNT_05664___ 51 ATTGGCATCAGCAAGATGGATGGGCCGGGGAAAAAAAGATGAGGCTGATG 100
.||.|||||.||.||||||||||||||.||.|||||||||||.|||||||
RBAM_034250__ 51 TTTAGCATCTGCCAGATGGATGGGCCGCGGGAAAAAAGATGAAGCTGATG 100
BSNT_05664___ 101 AAGCGGCAACAAGTGCAATGAGAGACGTTTTTGATACAGTGCCGATGAAA 150
|.|||||.|||||.||||||.|.|||||.|||||.||.||||||||||||
RBAM_034250__ 101 ATGCGGCGACAAGCGCAATGCGTGACGTGTTTGACACGGTGCCGATGAAA 150
BSNT_05664___ 151 GGGACCGTTGTAATCGGTGAAGGGGAAATGGACGAAGCGCCGATGCTGTA 200
||.||.||.||.|||||.|||||.||.|||||.||||||||||||||.||
RBAM_034250__ 151 GGCACGGTCGTGATCGGGGAAGGCGAGATGGATGAAGCGCCGATGCTTTA 200
BSNT_05664___ 201 TATCGGGGAAAAACTCGGAAACGGGTACGGCCCTCGCGTTGATGTCGCAG 250
.|||||.|||||.||.||||||||.||||||||.|||||.||||||||||
RBAM_034250__ 201 CATCGGCGAAAAGCTGGGAAACGGATACGGCCCGCGCGTCGATGTCGCAG 250
BSNT_05664___ 251 TTGACCCTCTTGAAGGCACAAACATCTTAGCAAGCGGCGGCTGGAACGCG 300
|.||.|||||||||||||||||||||.||||.||||||||||||||.|||
RBAM_034250__ 251 TCGATCCTCTTGAAGGCACAAACATCGTAGCGAGCGGCGGCTGGAATGCG 300
BSNT_05664___ 301 CTGACGGTGATCGCTGTCGCAGACCACGGCACTCTGCTGAATGCTCCTGA 350
||||||||||||||.|||||.|||||.||.||.||||||||.||.||.||
RBAM_034250__ 301 CTGACGGTGATCGCGGTCGCCGACCATGGAACACTGCTGAACGCCCCGGA 350
BSNT_05664___ 351 CATGTATATGCAAAAAATCGCAGTCGGTCCGGAAGCGGTGGGCTGCATTG 400
.|||||||||.||||||||||.||||||||.||||||||.||||||||.|
RBAM_034250__ 351 TATGTATATGGAAAAAATCGCGGTCGGTCCCGAAGCGGTAGGCTGCATCG 400
BSNT_05664___ 401 ACATCGAAGCACCTGTCATTGACAACCTTAAAGCGGTGGCAAAAGCGAAA 450
|.||.|||||.|||||||||||.|||.|.|||||.||.||.|||||||||
RBAM_034250__ 401 ATATTGAAGCGCCTGTCATTGATAACTTAAAAGCCGTTGCGAAAGCGAAA 450
BSNT_05664___ 451 AACAAGGACGTTGAGGACGTCGTTGCCACAATTTTAAACCGTGAAAGACA 500
|||||.|||.||||.||.|||||.||.||.||||||||.|||||.|||||
RBAM_034250__ 451 AACAAAGACATTGAAGATGTCGTGGCAACCATTTTAAATCGTGACAGACA 500
BSNT_05664___ 501 CGAAAAAATCATTTCCGAGCTTCGTGAGGCCGGCGCCAGAATCAAATTGA 550
.|||||||||||.||.||..|.||||||||.|||||||||||||||.|||
RBAM_034250__ 501 TGAAAAAATCATCTCTGAATTGCGTGAGGCGGGCGCCAGAATCAAACTGA 550
BSNT_05664___ 551 TCAATGACGGCGATGTCGCAGGCGCCATCAACACGGCTTTCGACCACACG 600
||||.|||||.||||||||.|||||||||||.|||||.||.|||||.|||
RBAM_034250__ 551 TCAACGACGGTGATGTCGCGGGCGCCATCAATACGGCCTTTGACCATACG 600
BSNT_05664___ 601 GGCGTTGATATCCTGTTCGGATCAGGCGGCGCTCCCGAGGGTGTGCTTTC 650
||.||.||.||.||.|||||.||||||||.|||||.||.||.|||||.||
RBAM_034250__ 601 GGAGTAGACATTCTCTTCGGTTCAGGCGGGGCTCCTGAAGGCGTGCTGTC 650
BSNT_05664___ 651 CGCTGTTGCGCTAAAAGCACTCGGAGGAGAAATCATTGGTAAACTTCTTC 700
.||.||||||.|||||||.|||||.||.||||||||.||.|..|||||.|
RBAM_034250__ 651 TGCCGTTGCGTTAAAAGCGCTCGGCGGCGAAATCATCGGCAGGCTTCTGC 700
BSNT_05664___ 701 CGCAAAGCGAAGAAGAAATCA--CTCGCTGTCACAAAATGGGCCTTGATT 748
|||||||.|..|||| |.|| |.||||||.|...|||||||||||||.
RBAM_034250__ 701 CGCAAAGTGCGGAAG--AGCAGGCCCGCTGTGAGCGAATGGGCCTTGATG 748
BSNT_05664___ 749 TAAGCAAAGTCCTTCGCATGGAAGACCTTGTGA-AGGGTGATGACGCGAT 797
||..||||||.||.||.|||||.|||||||||| |||| ||||||||.||
RBAM_034250__ 749 TATCCAAAGTGCTCCGGATGGAGGACCTTGTGAGAGGG-GATGACGCCAT 797
BSNT_05664___ 798 TTTTGCAGCTACAGGGGTTACTGACGGCGAGCTGTTAAAAGGAGTTCAAT 847
||||||.||.||.||.||.||.|||||.||||||.|.|||||.|||||.|
RBAM_034250__ 798 TTTTGCCGCAACGGGCGTCACGGACGGAGAGCTGCTGAAAGGCGTTCAGT 847
BSNT_05664___ 848 TCAAAGGCTCTGTCGGTACAACTGAAAGCTTAGTTATCCGCGCAAAATCG 897
||||||||||.|||||.||.||||||||..|.||.|||||.||.|||||.
RBAM_034250__ 848 TCAAAGGCTCCGTCGGCACGACTGAAAGTCTGGTCATCCGGGCGAAATCA 897
BSNT_05664___ 898 GGCACTGTTCGTTTCGTTGATGGCAGACACAGCTTGAAAAAGAAACCAAA 947
||.||.||.||.||||||||.||.|||||||||.||||.||.||||||||
RBAM_034250__ 898 GGAACGGTCCGATTCGTTGACGGAAGACACAGCCTGAAGAAAAAACCAAA 947
BSNT_05664___ 948 TCTTGTAATCCGTCCATAA 966
||||||.|||||.||||||
RBAM_034250__ 948 TCTTGTGATCCGGCCATAA 966
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