Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05655 and RBAM_034200
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:09
# Commandline: needle
# -asequence pep-align/BSNT_05655___ywkB.1.9828.seq
# -bsequence pep-align/RBAM_034200___ywkB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05655___ywkB-RBAM_034200___ywkB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05655___ywkB-RBAM_034200___ywkB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05655___ywkB
# 2: RBAM_034200___ywkB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 319
# Identity: 285/319 (89.3%)
# Similarity: 301/319 (94.4%)
# Gaps: 1/319 ( 0.3%)
# Score: 1384.0
#
#
#=======================================
BSNT_05655___ 1 MSILDILILLAPIFFVIVLGWFAGHFGSYDAKSAKGVSTLVTKYALPAHF 50
||.|||||||||||||||||||||.|||||||||||||||||||||||||
RBAM_034200__ 1 MSFLDILILLAPIFFVIVLGWFAGRFGSYDAKSAKGVSTLVTKYALPAHF 50
BSNT_05655___ 51 IAGILTTSRSEFLSQVPLMISLIIGIVGFYIIILLVCRFIFKYDLTNSSV 100
||.|||||||.||||||||::||||||||:|:|||||:||||||||||||
RBAM_034200__ 51 IASILTTSRSAFLSQVPLMVALIIGIVGFFIVILLVCKFIFKYDLTNSSV 100
BSNT_05655___ 101 FSLNSAQPTFAFMGIPVLGSLFGANEVAIPIAVTGIVVNAILDPLAIIIA 150
||||||||||||||||||||||||:|||||||||||||||||||||||||
RBAM_034200__ 101 FSLNSAQPTFAFMGIPVLGSLFGASEVAIPIAVTGIVVNAILDPLAIIIA 150
BSNT_05655___ 151 TVGESSKKNEESGDSFWKMTGKSILHGLCEPLAAAPLISMILVLVFNFTL 200
||||||||.:...::|||||||||||||.||||||||||:||||. ..||
RBAM_034200__ 151 TVGESSKKKDTENENFWKMTGKSILHGLSEPLAAAPLISIILVLC-GVTL 199
BSNT_05655___ 201 PELGVKMLDQLGSTTSGVALFAVGVTVGIRKIKLSMPAIGIALLKVAVQP 250
|.||.|||||||||||||||||||||||||.||||:||.|||||||||||
RBAM_034200__ 200 PGLGEKMLDQLGSTTSGVALFAVGVTVGIRNIKLSLPAFGIALLKVAVQP 249
BSNT_05655___ 251 ALMFLIALAIGLPADQTTKAILLVAFPGSAVAAMIATRFEKQEEETATAF 300
|||:|||||:||||||.|||:||||||||||||||||||||||||||:||
RBAM_034200__ 250 ALMYLIALAVGLPADQITKAVLLVAFPGSAVAAMIATRFEKQEEETASAF 299
BSNT_05655___ 301 VVSAILSLISLPIIIALTA 319
|:|||||||||||||||||
RBAM_034200__ 300 VISAILSLISLPIIIALTA 318
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