Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05652 and RBAM_034170
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:09
# Commandline: needle
# -asequence pep-align/BSNT_05652___prfA.1.9828.seq
# -bsequence pep-align/RBAM_034170___prfA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05652___prfA-RBAM_034170___prfA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05652___prfA-RBAM_034170___prfA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05652___prfA
# 2: RBAM_034170___prfA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 359
# Identity: 344/359 (95.8%)
# Similarity: 353/359 (98.3%)
# Gaps: 3/359 ( 0.8%)
# Score: 1745.0
#
#
#=======================================
BSNT_05652___ 1 ---MLDRLKSIEERYEKLNELLSDPEVVNDPKKLREYSKEQSDIQETVDV 47
:||||:|||:|||||||||||||||||||||||||||||||||||:|
RBAM_034170__ 1 MKTVLDRLQSIEQRYEKLNELLSDPEVVNDPKKLREYSKEQSDIQETVEV 50
BSNT_05652___ 48 YRQYRDASEQLADAKAMLEEKLDAEMRDMVKEEISELQKETETLSERLKV 97
||||||||||||||||||||||||:||:||||||||||.|||||||||||
RBAM_034170__ 51 YRQYRDASEQLADAKAMLEEKLDADMREMVKEEISELQGETETLSERLKV 100
BSNT_05652___ 98 LLIPKDPNDDKNVIMEIRGAAGGEEAALFAGNLYRMYSRYAELQGWKTEV 147
||||||||||||||||||||||||||||||||||||||||||:|||||||
RBAM_034170__ 101 LLIPKDPNDDKNVIMEIRGAAGGEEAALFAGNLYRMYSRYAEIQGWKTEV 150
BSNT_05652___ 148 MEANVTGTGGYKEIIFMITGSGAYSKLKYENGAHRVQRVPETESGGRIHT 197
||||||||||||||||||||.|||||||||||||||||||||||||||||
RBAM_034170__ 151 MEANVTGTGGYKEIIFMITGKGAYSKLKYENGAHRVQRVPETESGGRIHT 200
BSNT_05652___ 198 STATVACLPEAEEVEVDIHEKDIRVDTFASSGPGGQSVNTTMSAVRLTHL 247
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_034170__ 201 STATVACLPEAEEVEVDIHEKDIRVDTFASSGPGGQSVNTTMSAVRLTHL 250
BSNT_05652___ 248 PTGVVVSCQDEKSQIKNKEKAMKVLRARIYDKFQQEAQAEYDQTRKSAVG 297
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_034170__ 251 PTGVVVSCQDEKSQIKNKEKAMKVLRARIYDKFQQEAQAEYDQTRKSAVG 300
BSNT_05652___ 298 SGDRSERIRTYNFPQNRVTDHRIGLTIQKLDQILEGKLDEVVEALIVEDQ 347
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_034170__ 301 SGDRSERIRTYNFPQNRVTDHRIGLTIQKLDQILEGKLDEVVEALIVEDQ 350
BSNT_05652___ 348 ASKLQQSEG 356
:|||||:|.
RBAM_034170__ 351 SSKLQQAEN 359
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