Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05652 and RBAM_034170
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:09
# Commandline: needle
# -asequence dna-align/BSNT_05652___prfA.1.9828.seq
# -bsequence dna-align/RBAM_034170___prfA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05652___prfA-RBAM_034170___prfA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05652___prfA-RBAM_034170___prfA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05652___prfA
# 2: RBAM_034170___prfA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1080
# Identity: 914/1080 (84.6%)
# Similarity: 914/1080 (84.6%)
# Gaps: 9/1080 ( 0.8%)
# Score: 3942.0
#
#
#=======================================
BSNT_05652___ 1 ---------GTGTTAGACCGTTTAAAATCAATTGAAGAACGATACGAGAA 41
|||||||||||||||.|.|||||||||.||||||||||.||
RBAM_034170__ 1 GTGAAGACCGTGTTAGACCGTTTACAGTCAATTGAACAACGATACGAAAA 50
BSNT_05652___ 42 ATTAAATGAGCTTTTGAGCGATCCAGAAGTAGTCAACGATCCGAAAAAGC 91
|||||||||||||||.||.|||||.|||||.|||||||||||||||||||
RBAM_034170__ 51 ATTAAATGAGCTTTTAAGTGATCCGGAAGTGGTCAACGATCCGAAAAAGC 100
BSNT_05652___ 92 TAAGAGAATATTCAAAAGAGCAATCTGATATACAAGAAACAGTTGACGTA 141
|.|||||||||||.||||||||||||||||||||||||||.|||||.||.
RBAM_034170__ 101 TTAGAGAATATTCGAAAGAGCAATCTGATATACAAGAAACCGTTGAAGTC 150
BSNT_05652___ 142 TATAGACAATACAGAGATGCGTCAGAACAGCTGGCTGATGCAAAAGCGAT 191
|||||||||||||||||.||.|||||||||||.||.|||||.||||||||
RBAM_034170__ 151 TATAGACAATACAGAGACGCATCAGAACAGCTTGCCGATGCGAAAGCGAT 200
BSNT_05652___ 192 GCTTGAAGAGAAGCTGGATGCTGAGATGCGCGACATGGTGAAGGAAGAGA 241
||||||.||.|||||.|||||.||.|||.|.||.||||||||||||||.|
RBAM_034170__ 201 GCTTGAGGAAAAGCTTGATGCCGATATGAGAGAAATGGTGAAGGAAGAAA 250
BSNT_05652___ 242 TTTCTGAACTTCAGAAGGAAACGGAAACACTGTCAGAACGGCTGAAGGTG 291
|.||.|||||.|||...||.||||||||..|.|||||.||..||||.||.
RBAM_034170__ 251 TCTCCGAACTGCAGGGAGAGACGGAAACCTTATCAGAGCGTTTGAAAGTA 300
BSNT_05652___ 292 CTCCTGATCCCGAAAGATCCTAATGACGACAAAAACGTTATCATGGAGAT 341
|||||.|||||||||||.||.||.||.|||||||||||.|||||||||||
RBAM_034170__ 301 CTCCTCATCCCGAAAGACCCGAACGATGACAAAAACGTAATCATGGAGAT 350
BSNT_05652___ 342 CCGCGGGGCTGCGGGAGGCGAGGAAGCCGCTTTATTCGCGGGCAATCTGT 391
||||||.||.||||||||.||.||||||||..|.||.|||||.|||||.|
RBAM_034170__ 351 CCGCGGAGCAGCGGGAGGAGAAGAAGCCGCGCTGTTTGCGGGAAATCTCT 400
BSNT_05652___ 392 ACAGAATGTATTCCCGTTATGCTGAGCTTCAGGGCTGGAAAACAGAGGTC 441
||||||||||.|||||||||||.||..|.||.||||||||.||.||.|||
RBAM_034170__ 401 ACAGAATGTACTCCCGTTATGCCGAAATCCAAGGCTGGAAGACTGAAGTC 450
BSNT_05652___ 442 ATGGAAGCGAATGTAACCGGAACGGGCGGCTACAAAGAGATCATCTTTAT 491
||||||||.||.||.||||||||||||||.||||||||.|||||||||||
RBAM_034170__ 451 ATGGAAGCAAACGTGACCGGAACGGGCGGTTACAAAGAAATCATCTTTAT 500
BSNT_05652___ 492 GATTACAGGAAGCGGCGCGTATTCTAAACTCAAATATGAAAACGGCGCCC 541
||||||.||||..|||||.||.||.||.||.||.||||||||.|||||.|
RBAM_034170__ 501 GATTACGGGAAAAGGCGCATACTCCAAGCTGAAGTATGAAAATGGCGCGC 550
BSNT_05652___ 542 ACCGCGTACAGCGTGTTCCGGAAACAGAATCAGGCGGACGCATCCATACA 591
|||||||||||||||||||||||||.|||||||||||.||.||.||||||
RBAM_034170__ 551 ACCGCGTACAGCGTGTTCCGGAAACGGAATCAGGCGGCCGTATTCATACA 600
BSNT_05652___ 592 TCCACTGCAACAGTGGCATGTCTTCCTGAGGCAGAAGAGGTAGAGGTCGA 641
|||||.||.||.|||||.|||||||||||.||.|||||.|||||.||.||
RBAM_034170__ 601 TCCACGGCGACGGTGGCGTGTCTTCCTGAAGCGGAAGAAGTAGAAGTGGA 650
BSNT_05652___ 642 CATCCATGAGAAGGATATCCGTGTCGATACATTTGCTTCAAGCGGACCGG 691
||||||.||.||.||.|||||.|||||||||||.||.|||||||||||||
RBAM_034170__ 651 CATCCACGAAAAAGACATCCGCGTCGATACATTCGCATCAAGCGGACCGG 700
BSNT_05652___ 692 GCGGACAAAGCGTTAACACAACAATGTCTGCGGTTCGTCTGACTCACTTG 741
|||||||||||||.|||||.||.|||||.||.||.||.|||||.||.||.
RBAM_034170__ 701 GCGGACAAAGCGTAAACACGACGATGTCGGCCGTACGCCTGACGCATTTA 750
BSNT_05652___ 742 CCGACAGGTGTTGTTGTATCATGCCAGGATGAAAAATCTCAAATTAAGAA 791
|||||.|||||.||.|||||.||.|||||||||||||||||||||||.||
RBAM_034170__ 751 CCGACCGGTGTCGTCGTATCCTGTCAGGATGAAAAATCTCAAATTAAAAA 800
BSNT_05652___ 792 CAAAGAAAAAGCAATGAAGGTTCTCCGTGCCAGAATCTATGATAAATTTC 841
||||||||||||.||||||||.|||||.||||||||||||||.|||||.|
RBAM_034170__ 801 CAAAGAAAAAGCGATGAAGGTGCTCCGCGCCAGAATCTATGACAAATTCC 850
BSNT_05652___ 842 AGCAGGAAGCCCAGGCTGAATATGATCAAACACGGAAATCAGCAGTCGGA 891
||||||||||.|||||||||||||||||.||.||.||||||||.|||||.
RBAM_034170__ 851 AGCAGGAAGCTCAGGCTGAATATGATCAGACCCGTAAATCAGCCGTCGGT 900
BSNT_05652___ 892 TCTGGTGACCGCTCTGAACGTATCCGCACATACAACTTCCCGCAAAACCG 941
||.||.|||||.||.||.|||||||||||||||||.||||||||||||||
RBAM_034170__ 901 TCAGGCGACCGTTCCGAGCGTATCCGCACATACAATTTCCCGCAAAACCG 950
BSNT_05652___ 942 TGTGACGGATCACAGAATCGGTTTGACGATTCAAAAGCTTGATCAGATTC 991
|||||||||||||.|.|||||..||||||||||||||||.|||||.||.|
RBAM_034170__ 951 TGTGACGGATCACCGCATCGGCCTGACGATTCAAAAGCTGGATCAAATCC 1000
BSNT_05652___ 992 TTGAAGGAAAACTTGACGAAGTGGTTGAAGCGCTGATTGTTGAAGATCAG 1041
|.|||||.||.|||||.|||||||||||||||.|.||.||.|||||.|||
RBAM_034170__ 1001 TGGAAGGCAAGCTTGATGAAGTGGTTGAAGCGTTAATCGTAGAAGACCAG 1050
BSNT_05652___ 1042 GCAAGCAAGCTTCAGCAGTCGGAAGGTTAA 1071
.||||||||||.||||||.|||||..||||
RBAM_034170__ 1051 TCAAGCAAGCTCCAGCAGGCGGAAAATTAA 1080
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