Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05649 and RBAM_034150

See DNA alignment / Visit BSNT_05649 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:08
# Commandline: needle
#    -asequence pep-align/BSNT_05649___ywkF.1.9828.seq
#    -bsequence pep-align/RBAM_034150___ywkF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05649___ywkF-RBAM_034150___ywkF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05649___ywkF-RBAM_034150___ywkF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05649___ywkF
# 2: RBAM_034150___ywkF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 95
# Identity:      52/95 (54.7%)
# Similarity:    65/95 (68.4%)
# Gaps:           3/95 ( 3.2%)
# Score: 247.5
# 
#
#=======================================

BSNT_05649___      1 MKKALTAGILLIAIESMIGTIFPQALSYEAIFGVASLVLVGLAIITSGLA     50
                     ||||.|.|.:|.|.....|.:.|  ...:.|||..:.||:..|||.||||
RBAM_034150__      1 MKKAFTFGCILAAAAYAAGVVLP--FGVDIIFGAVTAVLIVTAIIVSGLA     48

BSNT_05649___     51 VSGSDQRANYHSETKEGRTSRMKMAAAFFVAAIPSILCYLLTILF     95
                     |||::|||||||||:|||.:|:||||.||.||:||..|.|:|:| 
RBAM_034150__     49 VSGAEQRANYHSETEEGRHARLKMAAVFFCAALPSAGCLLITLL-     92


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