Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05647 and RBAM_034130

See DNA alignment / Visit BSNT_05647 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:08
# Commandline: needle
#    -asequence pep-align/BSNT_05647___spoIIR.1.9828.seq
#    -bsequence pep-align/RBAM_034130___spoIIR.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05647___spoIIR-RBAM_034130___spoIIR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05647___spoIIR-RBAM_034130___spoIIR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05647___spoIIR
# 2: RBAM_034130___spoIIR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 228
# Identity:     179/228 (78.5%)
# Similarity:   209/228 (91.7%)
# Gaps:           6/228 ( 2.6%)
# Score: 921.5
# 
#
#=======================================

BSNT_05647___      1 MKKTVIICIYIFLLLSGALVGLAKEETAQKSENQPVVIPDQAIRLRILAN     50
                     ||:|::|||||||||||||.||.|||||:.|.|:||||||:|||||||||
RBAM_034130__      1 MKQTMMICIYIFLLLSGALAGLTKEETARASANEPVVIPDEAIRLRILAN     50

BSNT_05647___     51 SDSDQDQQLKRHIRDAVNKEITTWVKDITSIEEARRVIRSKLPEIKAIAK    100
                     ||:|:||:|||.|||||||:||.|||||||||||||:|||||||||.|||
RBAM_034130__     51 SDNDEDQKLKRQIRDAVNKQITDWVKDITSIEEARRLIRSKLPEIKEIAK    100

BSNT_05647___    101 ETMEKEGANQSISVDFDKISFPTKLYGNMVYPAGEYEAILITLGNGDGAN    150
                     :||:::||:||:||.|:|||||||||||||||||:|||||||||||:|||
RBAM_034130__    101 QTMKEKGAHQSVSVQFNKISFPTKLYGNMVYPAGKYEAILITLGNGEGAN    150

BSNT_05647___    151 WWCVLFPPLCFLDFSNGEAVKEQED----KEASKKQTEKVLEDVTAKAEK    196
                     |||||||||||||||||||||:|||    :..::|||:|||:||..||:|
RBAM_034130__    151 WWCVLFPPLCFLDFSNGEAVKDQEDGGQKQGETQKQTKKVLDDVKTKADK    200

BSNT_05647___    197 AKKEENKEKEDGTEVKFFLVEWISDLFS    224
                     ||| |||: :|.||||||||:|||||||
RBAM_034130__    201 AKK-ENKD-DDDTEVKFFLVDWISDLFS    226


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