Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05646 and RBAM_034120

See DNA alignment / Visit BSNT_05646 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:08
# Commandline: needle
#    -asequence pep-align/BSNT_05646___ywlB.1.9828.seq
#    -bsequence pep-align/RBAM_034120___ywlB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05646___ywlB-RBAM_034120___ywlB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05646___ywlB-RBAM_034120___ywlB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05646___ywlB
# 2: RBAM_034120___ywlB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 147
# Identity:      90/147 (61.2%)
# Similarity:   117/147 (79.6%)
# Gaps:           0/147 ( 0.0%)
# Score: 458.0
# 
#
#=======================================

BSNT_05646___      1 MFYQLRVAREKDGDVLEAFLKQAKTSYEGVKEGFTQFLMLEDSEKNIAGC     50
                     |||||||||::|.:.||||||:|.|::..:.:..::|::||||||.||.|
RBAM_034120__      1 MFYQLRVARDQDTEALEAFLKKADTAHAEIDQQISRFIVLEDSEKMIAAC     50

BSNT_05646___     51 LGIEKISCDQGLLRSLVISDKLHQGHIVTLFQSMEVLCEKHQIKTVYLVA    100
                     |||||.|..:|||||||:||:|:|.|||||||||:|||:||:|:.|||||
RBAM_034120__     51 LGIEKFSGGKGLLRSLVMSDRLNQSHIVTLFQSMDVLCKKHEIQDVYLVA    100

BSNT_05646___    101 NQHSSADFLTAMGFERAESVPEELFSSDHFCDSRQTEGAVLMKKASG    147
                     ||.|||:||..||||.....|:||::|:||.:|..|||:.||.|.|.
RBAM_034120__    101 NQPSSAEFLNVMGFEACADAPDELYTSEHFRNSLCTEGSFLMVKTSA    147


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