Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05635 and RBAM_034050
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:07
# Commandline: needle
# -asequence pep-align/BSNT_05635___upp.1.9828.seq
# -bsequence pep-align/RBAM_034050___upp.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05635___upp-RBAM_034050___upp.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05635___upp-RBAM_034050___upp.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05635___upp
# 2: RBAM_034050___upp
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 209
# Identity: 195/209 (93.3%)
# Similarity: 206/209 (98.6%)
# Gaps: 0/209 ( 0.0%)
# Score: 1015.0
#
#
#=======================================
BSNT_05635___ 1 MGKVYVFDHPLIQHKLTYIRNENTGTKDFRELVDEVATLMAFEITRDLPL 50
||||||||||||||||||||||||||||||:||||||:||||||||||||
RBAM_034050__ 1 MGKVYVFDHPLIQHKLTYIRNENTGTKDFRDLVDEVASLMAFEITRDLPL 50
BSNT_05635___ 51 EEVDINTPVQAAKSKVISGKKLGVVPILRAGLGMVDGILKLIPAAKVGHV 100
:||::.||||.|.||||||||||:|||||||||||||:||||||||||||
RBAM_034050__ 51 KEVEVKTPVQTATSKVISGKKLGIVPILRAGLGMVDGMLKLIPAAKVGHV 100
BSNT_05635___ 101 GLYRDPETLKPVEYYVKLPSDVEEREFIVVDPMLATGGSAVEAIHSLKKR 150
||||||||||||||||||||||||||||||||||||||||||||:|||||
RBAM_034050__ 101 GLYRDPETLKPVEYYVKLPSDVEEREFIVVDPMLATGGSAVEAINSLKKR 150
BSNT_05635___ 151 GAKNIRFMCLVAAPEGVEELQKHHSDVDIYIAALDEKLNEKGYIVPGLGD 200
||:|||||||||||||||||||||||||||||||||||||||||||||||
RBAM_034050__ 151 GARNIRFMCLVAAPEGVEELQKHHSDVDIYIAALDEKLNEKGYIVPGLGD 200
BSNT_05635___ 201 AGDRMFGTK 209
||||::|||
RBAM_034050__ 201 AGDRLYGTK 209
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