Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05635 and RBAM_034050
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:08
# Commandline: needle
# -asequence dna-align/BSNT_05635___upp.1.9828.seq
# -bsequence dna-align/RBAM_034050___upp.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05635___upp-RBAM_034050___upp.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05635___upp-RBAM_034050___upp.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05635___upp
# 2: RBAM_034050___upp
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 630
# Identity: 519/630 (82.4%)
# Similarity: 519/630 (82.4%)
# Gaps: 0/630 ( 0.0%)
# Score: 2151.0
#
#
#=======================================
BSNT_05635___ 1 ATGGGAAAGGTTTATGTATTTGATCATCCTTTAATTCAGCACAAGCTGAC 50
||||||||||||||.||||||||||||||||||||.|||||.||||||||
RBAM_034050__ 1 ATGGGAAAGGTTTACGTATTTGATCATCCTTTAATCCAGCATAAGCTGAC 50
BSNT_05635___ 51 ATATATACGGAATGAAAATACAGGTACGAAGGATTTTAGAGAGTTAGTAG 100
||||||.|||||||||||||||||.||.||||||||.|||||..|.||.|
RBAM_034050__ 51 ATATATTCGGAATGAAAATACAGGCACAAAGGATTTCAGAGACCTTGTGG 100
BSNT_05635___ 101 ATGAAGTGGCTACACTCATGGCATTTGAAATTACCCGCGATCTTCCTCTG 150
|.|||||.||..||||.|||||.|||||||||||.||.|||||||||||.
RBAM_034050__ 101 ACGAAGTCGCATCACTGATGGCGTTTGAAATTACACGTGATCTTCCTCTT 150
BSNT_05635___ 151 GAAGAAGTGGATATCAATACACCGGTTCAGGCTGCGAAATCGAAAGTCAT 200
.||||||||||..|.||.|||||.|||||..|.||||.|||.|||||.||
RBAM_034050__ 151 AAAGAAGTGGAAGTGAAAACACCTGTTCAAACAGCGACATCCAAAGTGAT 200
BSNT_05635___ 201 CTCAGGGAAAAAACTCGGAGTGGTTCCTATCCTCAGAGCAGGATTGGGAA 250
.||||||||.||||||||..|.||.||.|||||.|||||.||..|.||||
RBAM_034050__ 201 TTCAGGGAAGAAACTCGGTATCGTGCCGATCCTGAGAGCGGGTCTCGGAA 250
BSNT_05635___ 251 TGGTTGACGGCATTTTAAAGCTGATTCCTGCGGCAAAAGTGGGACATGTC 300
|||||||||||||..|.||..|.||.||.||.||.|||||||||||||||
RBAM_034050__ 251 TGGTTGACGGCATGCTGAAATTAATCCCGGCCGCTAAAGTGGGACATGTC 300
BSNT_05635___ 301 GGCCTTTACCGTGATCCAGAAACCTTAAAACCCGTGGAATACTATGTCAA 350
||..|.|||||||||||.||||||||||||||.|||||||||||||||||
RBAM_034050__ 301 GGATTATACCGTGATCCGGAAACCTTAAAACCGGTGGAATACTATGTCAA 350
BSNT_05635___ 351 GCTTCCTTCTGATGTGGAAGAGCGTGAATTCATCGTGGTTGACCCGATGC 400
|||||||||||||||.|||||.||.|||||.||.||.||.||.|||||||
RBAM_034050__ 351 GCTTCCTTCTGATGTAGAAGAACGCGAATTTATTGTCGTGGATCCGATGC 400
BSNT_05635___ 401 TCGCTACAGGCGGTTCCGCAGTTGAAGCCATTCACAGCCTTAAAAAACGC 450
|.|||||.||.|||||.||.||.|||||.||..|||||||.|||||.|||
RBAM_034050__ 401 TTGCTACGGGAGGTTCTGCGGTGGAAGCGATAAACAGCCTGAAAAAGCGC 450
BSNT_05635___ 451 GGTGCGAAAAATATCCGTTTCATGTGTCTTGTAGCAGCGCCGGAGGGTGT 500
||.||||.|||.||.|||||.||||||||||||||.||.|||||.||.||
RBAM_034050__ 451 GGCGCGAGAAACATTCGTTTTATGTGTCTTGTAGCGGCTCCGGAAGGCGT 500
BSNT_05635___ 501 GGAAGAATTGCAGAAGCATCATTCGGACGTTGATATTTACATTGCGGCGC 550
||||||..|||||||.||.|||||.|||||||||||||||||.||.||.|
RBAM_034050__ 501 GGAAGAGCTGCAGAAACACCATTCTGACGTTGATATTTACATCGCCGCCC 550
BSNT_05635___ 551 TAGATGAAAAATTAAATGAAAAAGGATATATTGTTCCAGGTCTCGGAGAT 600
|.|||||||||.|.|||||||||||.|||||.|||||.||.|||||.||.
RBAM_034050__ 551 TTGATGAAAAACTGAATGAAAAAGGCTATATCGTTCCGGGCCTCGGTGAC 600
BSNT_05635___ 601 GCTGGTGACCGCATGTTTGGAACAAAATAA 630
||.||||||.|..|||..|||||.||||||
RBAM_034050__ 601 GCGGGTGACAGACTGTACGGAACCAAATAA 630
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