Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05635 and RBAM_034050

See Amino acid alignment / Visit BSNT_05635 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:08
# Commandline: needle
#    -asequence dna-align/BSNT_05635___upp.1.9828.seq
#    -bsequence dna-align/RBAM_034050___upp.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05635___upp-RBAM_034050___upp.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05635___upp-RBAM_034050___upp.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05635___upp
# 2: RBAM_034050___upp
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 630
# Identity:     519/630 (82.4%)
# Similarity:   519/630 (82.4%)
# Gaps:           0/630 ( 0.0%)
# Score: 2151.0
# 
#
#=======================================

BSNT_05635___      1 ATGGGAAAGGTTTATGTATTTGATCATCCTTTAATTCAGCACAAGCTGAC     50
                     ||||||||||||||.||||||||||||||||||||.|||||.||||||||
RBAM_034050__      1 ATGGGAAAGGTTTACGTATTTGATCATCCTTTAATCCAGCATAAGCTGAC     50

BSNT_05635___     51 ATATATACGGAATGAAAATACAGGTACGAAGGATTTTAGAGAGTTAGTAG    100
                     ||||||.|||||||||||||||||.||.||||||||.|||||..|.||.|
RBAM_034050__     51 ATATATTCGGAATGAAAATACAGGCACAAAGGATTTCAGAGACCTTGTGG    100

BSNT_05635___    101 ATGAAGTGGCTACACTCATGGCATTTGAAATTACCCGCGATCTTCCTCTG    150
                     |.|||||.||..||||.|||||.|||||||||||.||.|||||||||||.
RBAM_034050__    101 ACGAAGTCGCATCACTGATGGCGTTTGAAATTACACGTGATCTTCCTCTT    150

BSNT_05635___    151 GAAGAAGTGGATATCAATACACCGGTTCAGGCTGCGAAATCGAAAGTCAT    200
                     .||||||||||..|.||.|||||.|||||..|.||||.|||.|||||.||
RBAM_034050__    151 AAAGAAGTGGAAGTGAAAACACCTGTTCAAACAGCGACATCCAAAGTGAT    200

BSNT_05635___    201 CTCAGGGAAAAAACTCGGAGTGGTTCCTATCCTCAGAGCAGGATTGGGAA    250
                     .||||||||.||||||||..|.||.||.|||||.|||||.||..|.||||
RBAM_034050__    201 TTCAGGGAAGAAACTCGGTATCGTGCCGATCCTGAGAGCGGGTCTCGGAA    250

BSNT_05635___    251 TGGTTGACGGCATTTTAAAGCTGATTCCTGCGGCAAAAGTGGGACATGTC    300
                     |||||||||||||..|.||..|.||.||.||.||.|||||||||||||||
RBAM_034050__    251 TGGTTGACGGCATGCTGAAATTAATCCCGGCCGCTAAAGTGGGACATGTC    300

BSNT_05635___    301 GGCCTTTACCGTGATCCAGAAACCTTAAAACCCGTGGAATACTATGTCAA    350
                     ||..|.|||||||||||.||||||||||||||.|||||||||||||||||
RBAM_034050__    301 GGATTATACCGTGATCCGGAAACCTTAAAACCGGTGGAATACTATGTCAA    350

BSNT_05635___    351 GCTTCCTTCTGATGTGGAAGAGCGTGAATTCATCGTGGTTGACCCGATGC    400
                     |||||||||||||||.|||||.||.|||||.||.||.||.||.|||||||
RBAM_034050__    351 GCTTCCTTCTGATGTAGAAGAACGCGAATTTATTGTCGTGGATCCGATGC    400

BSNT_05635___    401 TCGCTACAGGCGGTTCCGCAGTTGAAGCCATTCACAGCCTTAAAAAACGC    450
                     |.|||||.||.|||||.||.||.|||||.||..|||||||.|||||.|||
RBAM_034050__    401 TTGCTACGGGAGGTTCTGCGGTGGAAGCGATAAACAGCCTGAAAAAGCGC    450

BSNT_05635___    451 GGTGCGAAAAATATCCGTTTCATGTGTCTTGTAGCAGCGCCGGAGGGTGT    500
                     ||.||||.|||.||.|||||.||||||||||||||.||.|||||.||.||
RBAM_034050__    451 GGCGCGAGAAACATTCGTTTTATGTGTCTTGTAGCGGCTCCGGAAGGCGT    500

BSNT_05635___    501 GGAAGAATTGCAGAAGCATCATTCGGACGTTGATATTTACATTGCGGCGC    550
                     ||||||..|||||||.||.|||||.|||||||||||||||||.||.||.|
RBAM_034050__    501 GGAAGAGCTGCAGAAACACCATTCTGACGTTGATATTTACATCGCCGCCC    550

BSNT_05635___    551 TAGATGAAAAATTAAATGAAAAAGGATATATTGTTCCAGGTCTCGGAGAT    600
                     |.|||||||||.|.|||||||||||.|||||.|||||.||.|||||.||.
RBAM_034050__    551 TTGATGAAAAACTGAATGAAAAAGGCTATATCGTTCCGGGCCTCGGTGAC    600

BSNT_05635___    601 GCTGGTGACCGCATGTTTGGAACAAAATAA    630
                     ||.||||||.|..|||..|||||.||||||
RBAM_034050__    601 GCGGGTGACAGACTGTACGGAACCAAATAA    630


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