Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05631 and RBAM_034040

See DNA alignment / Visit BSNT_05631 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:07
# Commandline: needle
#    -asequence pep-align/BSNT_05631___atpI.1.9828.seq
#    -bsequence pep-align/RBAM_034040___atpI.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05631___atpI-RBAM_034040___atpI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05631___atpI-RBAM_034040___atpI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05631___atpI
# 2: RBAM_034040___atpI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 127
# Identity:     103/127 (81.1%)
# Similarity:   113/127 (89.0%)
# Gaps:           0/127 ( 0.0%)
# Score: 522.0
# 
#
#=======================================

BSNT_05631___      1 MDDPKLTFSRQRKYLLFILAVYVLGYGLTAYKTVFLGLILGTVFSLFNFL     50
                     ||||.|||||||:|:..|||:|:|||||||||||||||.|||||||||..
RBAM_034040__      1 MDDPNLTFSRQRRYVFVILAIYLLGYGLTAYKTVFLGLFLGTVFSLFNLW     50

BSNT_05631___     51 LLVRRMNAFDRAVEKGKSIRSLGSAARWCNAILAVAVAYKNPEYFHMAST    100
                     ||.|||||||:||.||||||||||||||||||||:|||:|.|:...:||.
RBAM_034040__     51 LLTRRMNAFDKAVAKGKSIRSLGSAARWCNAILAMAVAFKYPDKVSVASV    100

BSNT_05631___    101 VIGLMTIYPVIMIDSFIQLKRSSMEER    127
                     :||||||||||||||.|||||||||||
RBAM_034040__    101 IIGLMTIYPVIMIDSIIQLKRSSMEER    127


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