Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05631 and RBAM_034040
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:07
# Commandline: needle
# -asequence dna-align/BSNT_05631___atpI.1.9828.seq
# -bsequence dna-align/RBAM_034040___atpI.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05631___atpI-RBAM_034040___atpI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05631___atpI-RBAM_034040___atpI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05631___atpI
# 2: RBAM_034040___atpI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 388
# Identity: 328/388 (84.5%)
# Similarity: 328/388 (84.5%)
# Gaps: 8/388 ( 2.1%)
# Score: 1390.0
#
#
#=======================================
BSNT_05631___ 1 ATGGACGATCCCAAGCTTACATTTAGCAGACAACGCAAATATTTATTGTT 50
||||||||||||||.||||||||.|||||||||||.|.||||.||||..|
RBAM_034040__ 1 ATGGACGATCCCAATCTTACATTCAGCAGACAACGGAGATATGTATTTGT 50
BSNT_05631___ 51 CATTTTGGCAGTGTATGTACTGGGTTATGGTTTAACAGCGTATAAAACCG 100
.||.||.|||.|.|||.|.|||||.||||||.|.||.|||||||||||.|
RBAM_034040__ 51 AATCTTAGCAATCTATTTGCTGGGATATGGTCTTACGGCGTATAAAACTG 100
BSNT_05631___ 101 TTTTTTTAGGCCTTATTCTGGGAACTGTTTTCAGTTTGTTTAATTTTTTA 150
|||||||||||||..||.||||||||||||||||||||||||||||.|
RBAM_034040__ 101 TTTTTTTAGGCCTCTTTTTGGGAACTGTTTTCAGTTTGTTTAATTTGT-- 148
BSNT_05631___ 151 CTGCTCGT---CAGAAGAATGAATGCTTTTGACAGAGCTGTTGAGAAAGG 197
.||||.| |||||||||||||||||||||||..||.||.|.||||||
RBAM_034040__ 149 -GGCTCTTGACCAGAAGAATGAATGCTTTTGACAAGGCCGTGGCGAAAGG 197
BSNT_05631___ 198 AAAGTCCATACGATCTCTCGGGAGCGCAGCGCGGTGGTGCAATGCGATTC 247
|||||||||||||||.|||||||||||||||||.||||||||||||||.|
RBAM_034040__ 198 AAAGTCCATACGATCACTCGGGAGCGCAGCGCGTTGGTGCAATGCGATAC 247
BSNT_05631___ 248 TTGCTGTGGCTGTTGCCTATAAAAATCCCGAATACTTTCA-TATGGCAAG 296
||||..|||||||.||||.||||.|||||| |||...||| |.|||||||
RBAM_034040__ 248 TTGCGATGGCTGTCGCCTTTAAATATCCCG-ATAAAGTCAGTGTGGCAAG 296
BSNT_05631___ 297 TACAGTTATTGGATTAATGACAATATACCCTGTCATTATGATAGATTCCT 346
|....|||||||||||||||||||.||.||.||||||||||||||||||.
RBAM_034040__ 297 TGTGATTATTGGATTAATGACAATTTATCCCGTCATTATGATAGATTCCA 346
BSNT_05631___ 347 TTATCCAGCTTAAACGTTCATCAATGGAAGAGAGGTGA 384
||||.|||||.|||||||||||||||||||||||||||
RBAM_034040__ 347 TTATTCAGCTCAAACGTTCATCAATGGAAGAGAGGTGA 384
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