Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05631 and RBAM_034040

See Amino acid alignment / Visit BSNT_05631 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:07
# Commandline: needle
#    -asequence dna-align/BSNT_05631___atpI.1.9828.seq
#    -bsequence dna-align/RBAM_034040___atpI.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05631___atpI-RBAM_034040___atpI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05631___atpI-RBAM_034040___atpI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05631___atpI
# 2: RBAM_034040___atpI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 388
# Identity:     328/388 (84.5%)
# Similarity:   328/388 (84.5%)
# Gaps:           8/388 ( 2.1%)
# Score: 1390.0
# 
#
#=======================================

BSNT_05631___      1 ATGGACGATCCCAAGCTTACATTTAGCAGACAACGCAAATATTTATTGTT     50
                     ||||||||||||||.||||||||.|||||||||||.|.||||.||||..|
RBAM_034040__      1 ATGGACGATCCCAATCTTACATTCAGCAGACAACGGAGATATGTATTTGT     50

BSNT_05631___     51 CATTTTGGCAGTGTATGTACTGGGTTATGGTTTAACAGCGTATAAAACCG    100
                     .||.||.|||.|.|||.|.|||||.||||||.|.||.|||||||||||.|
RBAM_034040__     51 AATCTTAGCAATCTATTTGCTGGGATATGGTCTTACGGCGTATAAAACTG    100

BSNT_05631___    101 TTTTTTTAGGCCTTATTCTGGGAACTGTTTTCAGTTTGTTTAATTTTTTA    150
                     |||||||||||||..||.||||||||||||||||||||||||||||.|  
RBAM_034040__    101 TTTTTTTAGGCCTCTTTTTGGGAACTGTTTTCAGTTTGTTTAATTTGT--    148

BSNT_05631___    151 CTGCTCGT---CAGAAGAATGAATGCTTTTGACAGAGCTGTTGAGAAAGG    197
                      .||||.|   |||||||||||||||||||||||..||.||.|.||||||
RBAM_034040__    149 -GGCTCTTGACCAGAAGAATGAATGCTTTTGACAAGGCCGTGGCGAAAGG    197

BSNT_05631___    198 AAAGTCCATACGATCTCTCGGGAGCGCAGCGCGGTGGTGCAATGCGATTC    247
                     |||||||||||||||.|||||||||||||||||.||||||||||||||.|
RBAM_034040__    198 AAAGTCCATACGATCACTCGGGAGCGCAGCGCGTTGGTGCAATGCGATAC    247

BSNT_05631___    248 TTGCTGTGGCTGTTGCCTATAAAAATCCCGAATACTTTCA-TATGGCAAG    296
                     ||||..|||||||.||||.||||.|||||| |||...||| |.|||||||
RBAM_034040__    248 TTGCGATGGCTGTCGCCTTTAAATATCCCG-ATAAAGTCAGTGTGGCAAG    296

BSNT_05631___    297 TACAGTTATTGGATTAATGACAATATACCCTGTCATTATGATAGATTCCT    346
                     |....|||||||||||||||||||.||.||.||||||||||||||||||.
RBAM_034040__    297 TGTGATTATTGGATTAATGACAATTTATCCCGTCATTATGATAGATTCCA    346

BSNT_05631___    347 TTATCCAGCTTAAACGTTCATCAATGGAAGAGAGGTGA    384
                     ||||.|||||.|||||||||||||||||||||||||||
RBAM_034040__    347 TTATTCAGCTCAAACGTTCATCAATGGAAGAGAGGTGA    384


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