Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05626 and RBAM_034000
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:07
# Commandline: needle
# -asequence pep-align/BSNT_05626___atpH.1.9828.seq
# -bsequence pep-align/RBAM_034000___atpH.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05626___atpH-RBAM_034000___atpH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05626___atpH-RBAM_034000___atpH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05626___atpH
# 2: RBAM_034000___atpH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 181
# Identity: 146/181 (80.7%)
# Similarity: 171/181 (94.5%)
# Gaps: 0/181 ( 0.0%)
# Score: 733.0
#
#
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BSNT_05626___ 1 MSGSAVSKRYASALFDIANESAQLNQVEEELTVVKQVFQNEKALNDVLNH 50
||||||||||||||||||.|::|:|::||||||:|:||:||..|.:||:|
RBAM_034000__ 1 MSGSAVSKRYASALFDIAVETSQINEIEEELTVLKEVFRNEAGLQEVLSH 50
BSNT_05626___ 51 PKMPAAKKKELIQNAFGSLSQSVLNTIFLLIDRHRAAIVLELTDEFIKLA 100
||:.|||||||||.:||:||:|||:||||||||.|::||.:|||||||||
RBAM_034000__ 51 PKVSAAKKKELIQQSFGALSESVLHTIFLLIDRRRSSIVPDLTDEFIKLA 100
BSNT_05626___ 101 NEARQTEDAIVYSVKPLTDAEMLPLSQVFAKKAGVASLRIRNEVQTDLIG 150
|:|||||||:|||||||::||||.||||||||||:|||||||||||||||
RBAM_034000__ 101 NQARQTEDAVVYSVKPLSEAEMLSLSQVFAKKAGIASLRIRNEVQTDLIG 150
BSNT_05626___ 151 GIKVRIGNRIYDGSVSGKLQRIERQLAGENR 181
|||||||||||||||||||:|:||||||.||
RBAM_034000__ 151 GIKVRIGNRIYDGSVSGKLERMERQLAGGNR 181
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