Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05619 and RBAM_033950

See DNA alignment / Visit BSNT_05619 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:06
# Commandline: needle
#    -asequence pep-align/BSNT_05619___ywmA.1.9828.seq
#    -bsequence pep-align/RBAM_033950___ywmA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05619___ywmA-RBAM_033950___ywmA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05619___ywmA-RBAM_033950___ywmA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05619___ywmA
# 2: RBAM_033950___ywmA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 168
# Identity:     116/168 (69.0%)
# Similarity:   134/168 (79.8%)
# Gaps:          12/168 ( 7.1%)
# Score: 653.0
# 
#
#=======================================

BSNT_05619___      1 MVYFIGKELANVNHSFFQPEKQYGEDLPIFDQEWEAIAFYYDYRQSQIEE     50
                                :|||||.|||||||.||:||.|||||||||||||||.||
RBAM_033950__      1 -----------MNHSFFHPEKQYGETLPVFDHEWEAIAFYYDYRQSQTEE     39

BSNT_05619___     51 LNELCQFFNISLTYTRESLEELENLYFQSIQELLLADWNLPIEEFEKMIS    100
                     |.||||||||||.|:|.||.|:|.|||:||||||||||||||:|||||:|
RBAM_033950__     40 LKELCQFFNISLDYSRGSLLEVEALYFRSIQELLLADWNLPIDEFEKMLS     89

BSNT_05619___    101 VYLIDCVIARHEDAEWVVKPYPYKDGAYTLGFRRHRKSWHTMNACDGLYL    150
                     ||:|||.|..|:|||||||||||.|||||.|.||..|:|||.|.|:.|||
RBAM_033950__     90 VYVIDCAIRHHDDAEWVVKPYPYTDGAYTTGVRRGNKTWHTDNCCEHLYL    139

BSNT_05619___    151 RQEEDRPLLSLFDSLVRS    168
                     ::|||.||:.:::||:| 
RBAM_033950__    140 QKEEDHPLIGVYESLMR-    156


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