Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_05618 and RBAM_033940

See DNA alignment / Visit BSNT_05618 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:06
# Commandline: needle
#    -asequence pep-align/BSNT_05618___ywzB.1.9828.seq
#    -bsequence pep-align/RBAM_033940___ywzB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05618___ywzB-RBAM_033940___ywzB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05618___ywzB-RBAM_033940___ywzB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05618___ywzB
# 2: RBAM_033940___ywzB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 76
# Identity:      64/76 (84.2%)
# Similarity:    72/76 (94.7%)
# Gaps:           0/76 ( 0.0%)
# Score: 330.0
# 
#
#=======================================

BSNT_05618___      1 MSVLGQQAAIGIVVHLIFIAVTWWALQAVNIDPLIKKGKVVQARLLMILL     50
                     |:||||||||.|:|||:.||||||||||||.||||:|||:||||||:|||
RBAM_033940__      1 MNVLGQQAAISILVHLVCIAVTWWALQAVNFDPLIRKGKIVQARLLIILL     50

BSNT_05618___     51 TIAIGTAVANFFLDYLNYSQQLPYLF     76
                     |||||||||:||||||.||:||||||
RBAM_033940__     51 TIAIGTAVADFFLDYLTYSKQLPYLF     76


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.