Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05618 and RBAM_033940
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:06
# Commandline: needle
# -asequence dna-align/BSNT_05618___ywzB.1.9828.seq
# -bsequence dna-align/RBAM_033940___ywzB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05618___ywzB-RBAM_033940___ywzB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05618___ywzB-RBAM_033940___ywzB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05618___ywzB
# 2: RBAM_033940___ywzB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 231
# Identity: 179/231 (77.5%)
# Similarity: 179/231 (77.5%)
# Gaps: 0/231 ( 0.0%)
# Score: 687.0
#
#
#=======================================
BSNT_05618___ 1 ATGAGTGTATTGGGACAGCAGGCTGCAATCGGCATTGTCGTTCACCTGAT 50
.|||.|||||||||.||||||||.||||||.||||..|.|||||||||.|
RBAM_033940__ 1 GTGAATGTATTGGGGCAGCAGGCCGCAATCAGCATCCTGGTTCACCTGGT 50
BSNT_05618___ 51 TTTTATAGCAGTGACTTGGTGGGCGTTGCAAGCCGTCAATATAGATCCGT 100
.|..||.||.|||||.|||||||||.|.||.||||||||..|.||||||.
RBAM_033940__ 51 ATGCATTGCGGTGACATGGTGGGCGCTTCAGGCCGTCAACTTTGATCCGC 100
BSNT_05618___ 101 TAATCAAAAAAGGCAAAGTCGTGCAGGCTAGACTCCTGATGATTTTGCTG 150
|.|||..||||||.|||.|.||||||||.||.||.|||||.|||.|.||.
RBAM_033940__ 101 TGATCCGAAAAGGAAAAATAGTGCAGGCGAGGCTGCTGATCATTCTTCTT 150
BSNT_05618___ 151 ACAATTGCCATTGGAACGGCCGTTGCTAATTTCTTTTTAGATTATCTCAA 200
||.|||||.||.||.|||||.||.|||.|.|||||||||||||||||.|.
RBAM_033940__ 151 ACCATTGCGATCGGTACGGCAGTCGCTGACTTCTTTTTAGATTATCTTAC 200
BSNT_05618___ 201 TTATTCACAGCAGCTTCCCTATCTATTTTAA 231
.|||||..|.||||||||.||..||||||||
RBAM_033940__ 201 CTATTCGAAACAGCTTCCATACTTATTTTAA 231
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