Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05614 and RBAM_033910
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:06
# Commandline: needle
# -asequence pep-align/BSNT_05614___spoIID.1.9828.seq
# -bsequence pep-align/RBAM_033910___spoIID.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05614___spoIID-RBAM_033910___spoIID.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05614___spoIID-RBAM_033910___spoIID.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05614___spoIID
# 2: RBAM_033910___spoIID
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 346
# Identity: 271/346 (78.3%)
# Similarity: 304/346 (87.9%)
# Gaps: 6/346 ( 1.7%)
# Score: 1377.5
#
#
#=======================================
BSNT_05614___ 1 MKQFAITLSVLCALILLVPTLLVIPFQHNKEAGASVESE---KTAVSTKP 47
||.....||.||.|||||||:||:||| .|.||:|..| |||.:|:
RBAM_033910__ 1 MKPIVFLLSGLCILILLVPTILVLPFQ--AEKGAAVNREPGHKTAHTTR- 47
BSNT_05614___ 48 ASKGAETLKASPVSIPVYRTANQSVENIPLEEYVIGVVASEMPATFKPEA 97
.:|||||||.||||||||||:|.|||||||||||||||||||||.|||||
RBAM_033910__ 48 ETKGAETLKESPVSIPVYRTSNHSVENIPLEEYVIGVVASEMPANFKPEA 97
BSNT_05614___ 98 LKAQALAARTFIVRLMVSNSAVEAPKGSLVDDTQMFQVYKSKAELKKQWG 147
|||||||||||||||||::|||:||||||||||||||||:||::|||:||
RBAM_033910__ 98 LKAQALAARTFIVRLMVADSAVQAPKGSLVDDTQMFQVYQSKSQLKKEWG 147
BSNT_05614___ 148 TSYETKLKKITDAVTSTQGKILTYNNQPIEASFFSTSNGYTENAEAYWTS 197
:.|...|||||:||..||||||||:|:|||||||||||||||||||||||
RBAM_033910__ 148 SKYAHNLKKITNAVAGTQGKILTYDNKPIEASFFSTSNGYTENAEAYWTS 197
BSNT_05614___ 198 AIPYLKSVKSPWDKKSPKYKATKTFTAAEFQQKLGVKLDGSSAVGKITGE 247
||||||||||||||:||||.||:||:..||||||||:|.|.:.||:||..
RBAM_033910__ 198 AIPYLKSVKSPWDKQSPKYLATQTFSVPEFQQKLGVQLSGQNTVGQITAR 247
BSNT_05614___ 248 TPGHQVATAVINGKTLKGRDIREKLGLNSADFEWKRNGDTITVTTRGFGH 297
||||||||||||||.||||||||||||.||||||||||.:||:||:||||
RBAM_033910__ 248 TPGHQVATAVINGKKLKGRDIREKLGLRSADFEWKRNGGSITITTKGFGH 297
BSNT_05614___ 298 GVGMSQYGANFMAKEGKTVDDIVKYYYQGTQISEADAFLNKYMAKK 343
||||||||||:||::||:|.||||:||||..|||||:|||||||||
RBAM_033910__ 298 GVGMSQYGANYMAEQGKSVADIVKHYYQGVDISEADSFLNKYMAKK 343
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