Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05614 and RBAM_033910
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:06
# Commandline: needle
# -asequence dna-align/BSNT_05614___spoIID.1.9828.seq
# -bsequence dna-align/RBAM_033910___spoIID.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05614___spoIID-RBAM_033910___spoIID.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05614___spoIID-RBAM_033910___spoIID.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05614___spoIID
# 2: RBAM_033910___spoIID
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1055
# Identity: 792/1055 (75.1%)
# Similarity: 792/1055 (75.1%)
# Gaps: 46/1055 ( 4.4%)
# Score: 2850.5
#
#
#=======================================
BSNT_05614___ 1 ATGAAA-CAATTCGCAATCACACTATCCGTACTATGTGCATTGATTCTCT 49
|||||| |.||| |.|.|...||||||||..||.|||..|.|.|||||..
RBAM_033910__ 1 ATGAAACCGATT-GTATTTCTACTATCCGGGCTGTGTATACTTATTCTTC 49
BSNT_05614___ 50 TGGTTCCCA-CACTCTTGGTTATACCATTCCA-GCATAATAAGGA--AGC 95
|.||.|||| ||.|| |.||..|.||.||.|| |||.||.||||| |||
RBAM_033910__ 50 TAGTCCCCACCATTC-TCGTCCTTCCGTTTCAGGCAGAAAAAGGAGCAGC 98
BSNT_05614___ 96 GGGGGCCAGCGTAGAATCAGA------------AAAGACAGCAGTCAGCA 133
||| ||.|||| ||| ||||||..||.||
RBAM_033910__ 99 ---------CGT--AAACAGAGAGCCCGGACACAAA-ACAGCACACACCA 136
BSNT_05614___ 134 CGAAACCAGCATCGAAAGGAGCAGAAACATTGAAAGCATCACCTGTTTCT 183
| ||.||.|.|.||||||||||||||||||||||.|||||||||.||.
RBAM_033910__ 137 C---ACGAGAAACAAAAGGAGCAGAAACATTGAAAGAATCACCTGTATCC 183
BSNT_05614___ 184 ATTCCCGTCTATCGAACCGCAAATCAATCCGTAGAAAACATTCCGCTTGA 233
|||||.||.|||||.||..|.|||||.||.||||||||||||||||||||
RBAM_033910__ 184 ATTCCGGTTTATCGGACATCCAATCATTCTGTAGAAAACATTCCGCTTGA 233
BSNT_05614___ 234 AGAGTATGTGATTGGAGTCGTCGCCTCCGAAATGCCGGCAACCTTTAAAC 283
||||||.|||||.||.|||||.||.|||||||||||.||||.||||||||
RBAM_033910__ 234 AGAGTACGTGATCGGTGTCGTGGCTTCCGAAATGCCCGCAAACTTTAAAC 283
BSNT_05614___ 284 CTGAAGCACTGAAAGCCCAGGCGCTTGCCGCCAGAACATTTATTGTCAGA 333
|.||.||..|.||||||||||||||.||||||.|.|||||.||.||||||
RBAM_033910__ 284 CGGAGGCCTTAAAAGCCCAGGCGCTGGCCGCCCGGACATTCATCGTCAGA 333
BSNT_05614___ 334 CTGATGGTGTCAAATTCAGCGGTAGAAGCTCCTAAAGGCTCACTGGTGGA 383
||||||||..|..|.|||||.||..|.||.||.|||||.|||||||||||
RBAM_033910__ 334 CTGATGGTCGCTGACTCAGCCGTCCAGGCGCCGAAAGGATCACTGGTGGA 383
BSNT_05614___ 384 TGATACACAGATGTTCCAGGTGTATAAAAGC-AAAGCGGAGCTGAAAAAA 432
||||||.||.||||||||.||.|||.||||| ||||| .|||||||||||
RBAM_033910__ 384 TGATACGCAAATGTTCCAAGTCTATCAAAGCAAAAGC-CAGCTGAAAAAA 432
BSNT_05614___ 433 CAGTGGGGCAC-AAGCTATGAGACA-AAACTGAAGAAAATCACAGATGCG 480
.|.|||||..| ||| ||.| .||| ||.||.||||||||||||.|.|||
RBAM_033910__ 433 GAATGGGGTTCTAAG-TACG-CACACAACCTCAAGAAAATCACAAACGCG 480
BSNT_05614___ 481 GTAACCAGTACGCAAGGCAAAATCTTAACGTACAACAACCAGCCGATTGA 530
||..||.|.||||||||.||.||.|||||||||.|.|||.||||||||||
RBAM_033910__ 481 GTGGCCGGCACGCAAGGAAAGATTTTAACGTACGATAACAAGCCGATTGA 530
BSNT_05614___ 531 AGCATCCTTTTTCTCCACAAGCAACGGCTACACAGAGAATGCAGAAGCTT 580
.|||||.||.|||||.||.||||||||.||.||.||.|||||.|||||.|
RBAM_033910__ 531 GGCATCTTTCTTCTCTACGAGCAACGGGTATACGGAAAATGCGGAAGCCT 580
BSNT_05614___ 581 ATTGGACAAGTGCTATCCCATATTTAAAAAGCGTCAAAAGCCCATGGGAT 630
||||||||||.||.||.||.||||||||||||||.|||||.||.||||||
RBAM_033910__ 581 ATTGGACAAGCGCCATTCCTTATTTAAAAAGCGTGAAAAGTCCGTGGGAT 630
BSNT_05614___ 631 AAAAAGTCTCCGAAATATAAGGCAACGAAAACCTTTACAGCGGCAGAATT 680
||..|.||.|||||||||...||.||..|.|||||.|..|.|.|.||.||
RBAM_033910__ 631 AAGCAATCGCCGAAATATCTTGCCACCCAGACCTTCAGTGTGCCGGAGTT 680
BSNT_05614___ 681 TCAGCAAAAGCTTGGCGTCAAGCTGGATGGATCTAGCGCAGTAGGGA-AG 729
||||||||||||.|||||..||||....|||...|.|.|.|| |||| ||
RBAM_033910__ 681 TCAGCAAAAGCTCGGCGTACAGCTCTCGGGACAAAACACGGT-GGGACAG 729
BSNT_05614___ 730 ATTACCGGCGAG-ACACCGGGCCACCAGGTCGCAACTGCCGTCATTAACG 778
|||| |.||.|| ||.||||||||.||.||.|||||.||||||||.||||
RBAM_033910__ 730 ATTA-CAGCCAGAACGCCGGGCCATCAAGTGGCAACGGCCGTCATCAACG 778
BSNT_05614___ 779 GCAAGACGCTGAAAGGAAGAGACATACGTGAAAAGCTGGGTCTCAACTCC 828
||||.|.||||||.|||||||||||.||.|||||.||.||.|||...||.
RBAM_033910__ 779 GCAAAAAGCTGAAGGGAAGAGACATCCGGGAAAAACTCGGACTCCGTTCT 828
BSNT_05614___ 829 GCCGATTTTGAATGGAAGCGAAATGGAGACACAATTACAGTCACGACGAG 878
|||||.|||||||||||.|||||.||.|.||..||.||..|.|||||.|.
RBAM_033910__ 829 GCCGACTTTGAATGGAAACGAAACGGCGGCAGCATCACCATTACGACAAA 878
BSNT_05614___ 879 AGGATTTGGCCACGGTGTGGGGATGAGCCAATACGGAGCGAATTTTATGG 928
||||||.||||||||.||.||.||||||||.|||||.||.||||..||||
RBAM_033910__ 879 AGGATTCGGCCACGGCGTCGGCATGAGCCAGTACGGGGCCAATTACATGG 928
BSNT_05614___ 929 CCAAAGAAGGCAAAA-CGGTTGATGACATTGTAAAGTACTATTACCAAGG 977
|..||.|||.|||| |.||.|..|||||.||.|||.|.|||||.||.||
RBAM_033910__ 929 -CGGAGCAGGGAAAATCAGTGGCGGACATCGTCAAGCATTATTATCAGGG 977
BSNT_05614___ 978 CACACAAATTTCTGAGGCAGATGCGTTTTTGAATAAATATATGGCGAAAA 1027
...|.|.|||||.||.||||||.|.|||||.||.||||||||||||||||
RBAM_033910__ 978 AGTAGACATTTCCGAAGCAGATTCATTTTTAAACAAATATATGGCGAAAA 1027
BSNT_05614___ 1028 AGTAG 1032
|.|||
RBAM_033910__ 1028 AATAG 1032
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