Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05611 and RBAM_033900
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:06
# Commandline: needle
# -asequence pep-align/BSNT_05611___ywmC.1.9828.seq
# -bsequence pep-align/RBAM_033900___ywmC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05611___ywmC-RBAM_033900___ywmC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05611___ywmC-RBAM_033900___ywmC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05611___ywmC
# 2: RBAM_033900___ywmC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 228
# Identity: 148/228 (64.9%)
# Similarity: 180/228 (78.9%)
# Gaps: 1/228 ( 0.4%)
# Score: 759.0
#
#
#=======================================
BSNT_05611___ 1 MKKRLSLIMMTGLLFGLTSPAFAAEK-TETEAKAPANVAVLLDASGSMAK 49
|||..|||:|.||:....|||||||. .|.......|.|:||||||||||
RBAM_033900__ 1 MKKTFSLILMLGLMLTAASPAFAAENANEKTLSFKNNTAILLDASGSMAK 50
BSNT_05611___ 50 RIDGVSKFNSAKKEISKFASSLPEGTQVKMSVFGSEGNNKNSGKVQSCEA 99
|||||||:|.||:||.:||..:...:||:|:||||||||||||||||||:
RBAM_033900__ 51 RIDGVSKYNMAKEEIVRFADQIKSKSQVRMTVFGSEGNNKNSGKVQSCES 100
BSNT_05611___ 100 IRNVYGFQSFNEQSFLNSLNTIGPTGWTPIAKALNEAKSSFDQLDAKGEK 149
||.|||||.|:.||||||||.|||||||||||||.:||:||..|...|.|
RBAM_033900__ 101 IRGVYGFQRFDRQSFLNSLNGIGPTGWTPIAKALEDAKASFTGLHKLGSK 150
BSNT_05611___ 150 VVYLLTDGEETCGGNPIKTAKELQKENITVNVIGFDYKEGYKGQLNAIAK 199
.|:|||||||||||:|:||||||:|::|.|||||||:|||:.|||:.|||
RBAM_033900__ 151 SVFLLTDGEETCGGDPVKTAKELRKQHIKVNVIGFDFKEGFNGQLHEIAK 200
BSNT_05611___ 200 VGGGEYFPVYTQKDVEKIFTQQSLMLSK 227
.|||:|:..::|||:.:|||..:..|::
RBAM_033900__ 201 AGGGKYYEAHSQKDMNRIFTMAASSLAE 228
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