Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05608 and RBAM_033890
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:06
# Commandline: needle
# -asequence pep-align/BSNT_05608___ywmD.1.9828.seq
# -bsequence pep-align/RBAM_033890___ywmD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05608___ywmD-RBAM_033890___ywmD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05608___ywmD-RBAM_033890___ywmD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05608___ywmD
# 2: RBAM_033890___ywmD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 226
# Identity: 158/226 (69.9%)
# Similarity: 193/226 (85.4%)
# Gaps: 2/226 ( 0.9%)
# Score: 826.0
#
#
#=======================================
BSNT_05608___ 1 MKKLLAAGIIGLLTVSIASPSFAAEKQ-ADSNVAVLFDGSGSMVQKTGGE 49
|||:..|||:||||:|:.||.|||||: .::|||||||.||||:||||||
RBAM_033890__ 1 MKKMFTAGIVGLLTLSLGSPVFAAEKKHEETNVAVLFDASGSMIQKTGGE 50
BSNT_05608___ 50 RKIDIAKKSVKSFAELLPKDTNLMLRVFGHAGNNKLSGKALSCSTTETIY 99
||||:||:||.||||:||:|||||||||||.||||.||||:||:.|||:|
RBAM_033890__ 51 RKIDVAKESVTSFAEVLPEDTNLMLRVFGHKGNNKNSGKAVSCNATETLY 100
BSNT_05608___ 100 GLHPYEGSLFDNSLSELKPTGWTPIAKALADTRKEFEAFDADGKNVVYLI 149
||.||..:.|:.|||::||||||||||||:|||:|||...|.||||||||
RBAM_033890__ 101 GLQPYAVTPFEQSLSKIKPTGWTPIAKALSDTREEFERAGATGKNVVYLI 150
BSNT_05608___ 150 TDGEETCGGDPAAEIEKLRASNVDTIVNIIGFNFDVKGNEEMKQAAVAGC 199
|||||||||:|.|||:|||.:||:||||||||||.:||:|.:::||.||.
RBAM_033890__ 151 TDGEETCGGNPQAEIQKLRKANVNTIVNIIGFNFGMKGSESLEKAAEAGG 200
BSNT_05608___ 200 GEYISANSADEFEQAWEKEAQKFTE- 224
|.|:||:|||||:||||..|:...:
RBAM_033890__ 201 GTYVSADSADEFKQAWEDAAKDLAKE 226
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