Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05592 and RBAM_033820

See DNA alignment / Visit BSNT_05592 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:05
# Commandline: needle
#    -asequence pep-align/BSNT_05592___ureB.1.9828.seq
#    -bsequence pep-align/RBAM_033820___ureB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05592___ureB-RBAM_033820___ureB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05592___ureB-RBAM_033820___ureB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05592___ureB
# 2: RBAM_033820___ureB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 124
# Identity:      96/124 (77.4%)
# Similarity:   112/124 (90.3%)
# Gaps:           0/124 ( 0.0%)
# Score: 511.0
# 
#
#=======================================

BSNT_05592___      1 MKPGVFQIAEGTITINEGREIREVTVKNTGSRSIQVGSHFHFAEANGALL     50
                     ||||..|:|:|.|||||||:..||:|.|.|:||:|||||||||||||||.
RBAM_033820__      1 MKPGAIQVAKGIITINEGRKTLEVSVTNNGTRSVQVGSHFHFAEANGALS     50

BSNT_05592___     51 FDRELAIGMRLDVPSGTSVRFEPGEQKTVSLVEIRGRKTIRGLNGMADTF    100
                     |:|:.|||||||:||||||||||||:|||:||||.||||:|||||||||:
RBAM_033820__     51 FNRDKAIGMRLDIPSGTSVRFEPGEEKTVTLVEIGGRKTVRGLNGMADTY    100

BSNT_05592___    101 IDERGKEKTLANLKQAGWMEGVIR    124
                     :|||||||||:|||:|||||..||
RBAM_033820__    101 MDERGKEKTLSNLKKAGWMEEAIR    124


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