Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05592 and RBAM_033820
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:05
# Commandline: needle
# -asequence dna-align/BSNT_05592___ureB.1.9828.seq
# -bsequence dna-align/RBAM_033820___ureB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05592___ureB-RBAM_033820___ureB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05592___ureB-RBAM_033820___ureB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05592___ureB
# 2: RBAM_033820___ureB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 376
# Identity: 284/376 (75.5%)
# Similarity: 284/376 (75.5%)
# Gaps: 2/376 ( 0.5%)
# Score: 1040.0
#
#
#=======================================
BSNT_05592___ 1 ATGAAGCCGGGAGTATTTCAAATTGCTGAGGGAACCATTACGATTAATGA 50
|||||||||||||...|||||.|.||..||||.|.|||.||.|||||.||
RBAM_033820__ 1 ATGAAGCCGGGAGCGATTCAAGTCGCAAAGGGGATCATCACCATTAACGA 50
BSNT_05592___ 51 AGGCCGTGAGATACGGGAGGTAACGGTAAAAAACACCGGATCACGCTCCA 100
||||||..|||..|.||||||..|.||.|..||.|.||||.||||.||..
RBAM_033820__ 51 AGGCCGGAAGACGCTGGAGGTGTCAGTCACCAATAACGGAACACGGTCAG 100
BSNT_05592___ 101 TTCAAGTCGGCTCGCATTTTCATTTTGCGGAGGCCAACGGGGCTTTATTA 150
|.||.||.||.|||||||||||||||||.||.||||||||.||..|.|..
RBAM_033820__ 101 TGCAGGTAGGATCGCATTTTCATTTTGCCGAAGCCAACGGCGCCCTTTCC 150
BSNT_05592___ 151 TTTGACCGTGAGCTGGCGATCGGCATGCGTCTTGATGTTCCATCAGGCAC 200
||..|.||.||....||.|||||||||||.||||||.|.||.||||||||
RBAM_033820__ 151 TTCAATCGGGACAAAGCAATCGGCATGCGCCTTGATATCCCGTCAGGCAC 200
BSNT_05592___ 201 GTCGGTCCGTTTTGAGCCGGGAGAGCAGAAAACGGTCTCACTAGTGGAAA 250
.||.|||||||||||.||||||||..|||||||.|||.|.||.|||||||
RBAM_033820__ 201 ATCTGTCCGTTTTGAACCGGGAGAAGAGAAAACCGTCACGCTCGTGGAAA 250
BSNT_05592___ 251 TCAGAGGACGCAAGACAATTAGAGGGCTGAACGGAATGGCCGACACGTTT 300
||.||||.||.||.||..|.|||||.||.|||||.||||||||.||||.|
RBAM_033820__ 251 TCGGAGGGCGAAAAACGGTCAGAGGTCTCAACGGCATGGCCGATACGTAT 300
BSNT_05592___ 301 ATCGATGAACGCGGCAAAGAAAAAACGTTGGCCAA-CTTAAAACAAGCCG 349
||.|||||.||.||.|||||.||.||..||.|.|| ||||||| ||||||
RBAM_033820__ 301 ATGGATGAGCGGGGAAAAGAGAAGACTCTGTCAAATCTTAAAA-AAGCCG 349
BSNT_05592___ 350 GCTGGATGGAGGGTGTAATCCGATGA 375
|.||||||||||..|..|||||||||
RBAM_033820__ 350 GATGGATGGAGGAGGCGATCCGATGA 375
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