Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05587 and RBAM_033780

See DNA alignment / Visit BSNT_05587 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:04
# Commandline: needle
#    -asequence pep-align/BSNT_05587___ywnC.1.9828.seq
#    -bsequence pep-align/RBAM_033780___ywnC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05587___ywnC-RBAM_033780___ywnC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05587___ywnC-RBAM_033780___ywnC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05587___ywnC
# 2: RBAM_033780___ywnC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 131
# Identity:      90/131 (68.7%)
# Similarity:   108/131 (82.4%)
# Gaps:           7/131 ( 5.3%)
# Score: 452.5
# 
#
#=======================================

BSNT_05587___      1 MNPETMNKTLISISKWGKATGILFIIMGAITALSGAFFFLIGAVPGVLQI     50
                     |.||::|::||||||||||||||||||||..||||||||||||:||||||
RBAM_033780__      1 MKPESVNRSLISISKWGKATGILFIIMGAFAALSGAFFFLIGAIPGVLQI     50

BSNT_05587___     51 ISGIFLMRSAREAGQMAEHNSGQSEDLMLENYAKFVKMQGIYLIVSIAVS    100
                     |:||||||||.|||||||..:..:|:.||||||||||||||||||:|.:|
RBAM_033780__     51 IAGIFLMRSANEAGQMAEQFNELTEEHMLENYAKFVKMQGIYLIVTIGLS    100

BSNT_05587___    101 ILAIIAFFIFLMLGIADGLF----SDTYSTY    127
                     :|.|:.|.:.:.|||.||:|    ::||   
RBAM_033780__    101 VLGIVLFIVLMTLGIVDGVFNNIDANTY---    128


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