Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05581 and RBAM_033740

See DNA alignment / Visit BSNT_05581 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:04
# Commandline: needle
#    -asequence pep-align/BSNT_05581___ywnH.1.9828.seq
#    -bsequence pep-align/RBAM_033740___ywnH.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05581___ywnH-RBAM_033740___ywnH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05581___ywnH-RBAM_033740___ywnH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05581___ywnH
# 2: RBAM_033740___ywnH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 165
# Identity:     131/165 (79.4%)
# Similarity:   145/165 (87.9%)
# Gaps:           0/165 ( 0.0%)
# Score: 692.0
# 
#
#=======================================

BSNT_05581___      1 MNMTLRLAEHRDLEAVVAIYNSTIASRMVTADTEPVTPEDRMEWFLGHTE     50
                     ||:|||.|...||:||||||||||||||||||||.|||.|||:|||.||:
RBAM_033740__      1 MNLTLRKAVLEDLDAVVAIYNSTIASRMVTADTEEVTPADRMDWFLRHTD     50

BSNT_05581___     51 ARPLYVAEDENGNVAAWISFETFYGRPAYNKTAEVSIYIDEACRGKGVGS    100
                     .|||.|||||.|.||||||||||||||||:||||:|||:.:.|||||.||
RBAM_033740__     51 RRPLMVAEDETGKVAAWISFETFYGRPAYDKTAEISIYLHQDCRGKGAGS    100

BSNT_05581___    101 YLLQEALRIAPDLGIRSLMAFIFGHNKPSLKLFEKHGFAEWGLFPGIAEM    150
                     :||:|||.:||.:|||||||||||||.||:|||||.||.|||:|||||||
RBAM_033740__    101 FLLKEALALAPTIGIRSLMAFIFGHNVPSIKLFEKFGFTEWGVFPGIAEM    150

BSNT_05581___    151 DGKRYDLKILGRELS    165
                     |||||||.|||||||
RBAM_033740__    151 DGKRYDLNILGRELS    165


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