Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05580 and RBAM_033730

See DNA alignment / Visit BSNT_05580 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:04
# Commandline: needle
#    -asequence pep-align/BSNT_05580___spoIIQ.1.9828.seq
#    -bsequence pep-align/RBAM_033730___spoIIQ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05580___spoIIQ-RBAM_033730___spoIIQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05580___spoIIQ-RBAM_033730___spoIIQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05580___spoIIQ
# 2: RBAM_033730___spoIIQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 291
# Identity:     240/291 (82.5%)
# Similarity:   263/291 (90.4%)
# Gaps:           3/291 ( 1.0%)
# Score: 1203.0
# 
#
#=======================================

BSNT_05580___      1 MREEEKKTSQVKKLQQFFRKRWVFPAIYLVSAAVILTAVLWYQSVSNDEV     50
                     |||||||||||||||:||||||:||||||||||||||||||||||||| |
RBAM_033730__      1 MREEEKKTSQVKKLQRFFRKRWIFPAIYLVSAAVILTAVLWYQSVSND-V     49

BSNT_05580___     51 KDQLADNGGNSAYDN-NDDAVEVGKSMENVAMPVVDSENVSVVKKFYETD     99
                     ||.|.:||||||||: .||||||||||||||||...||||||||||||||
RBAM_033730__     50 KDNLTNNGGNSAYDSGKDDAVEVGKSMENVAMPAAHSENVSVVKKFYETD     99

BSNT_05580___    100 AAKEEKEAALVTYNNTYSLSKGIDLAEKDGKDFDVSASLSGTVVKAEKDP    149
                     |||:|||||||.|||||||||||||||||||.||||||||||||||.|||
RBAM_033730__    100 AAKKEKEAALVNYNNTYSLSKGIDLAEKDGKSFDVSASLSGTVVKAAKDP    149

BSNT_05580___    150 VLGYVVEVEHADGLSTVYQSLSEVSVEQGDKVKQNQVIGKSGKNLYSEDS    199
                     |||||||:||:|||||||||||||||:|||||||||||||||||||||:|
RBAM_033730__    150 VLGYVVEIEHSDGLSTVYQSLSEVSVDQGDKVKQNQVIGKSGKNLYSEES    199

BSNT_05580___    200 GNHVHFEIRKDGVAMNPLNFMDKPVSSIEKAAAAEEKAATQETEESIQQS    249
                     |||||||||||||||||||||||||:|||||||.|:.|.|:|||.|||||
RBAM_033730__    200 GNHVHFEIRKDGVAMNPLNFMDKPVTSIEKAAAEEKNAVTEETEGSIQQS    249

BSNT_05580___    250 SEKKDGSTEKGTEEKSGEKKDDSTDKSGSKESSTTEDTEQS    290
                     |||||.:.:|.||||.|:|:|.:.||:..|:..:.:|:.: 
RBAM_033730__    250 SEKKDVTPKKETEEKPGDKEDGTKDKTDGKDDGSMKDSGK-    289


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