Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05570 and RBAM_033670
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:03
# Commandline: needle
# -asequence pep-align/BSNT_05570___ywoC.1.9828.seq
# -bsequence pep-align/RBAM_033670___ywoC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05570___ywoC-RBAM_033670___ywoC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05570___ywoC-RBAM_033670___ywoC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05570___ywoC
# 2: RBAM_033670___ywoC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 189
# Identity: 152/189 (80.4%)
# Similarity: 171/189 (90.5%)
# Gaps: 1/189 ( 0.5%)
# Score: 801.0
#
#
#=======================================
BSNT_05570___ 1 MMNTLNIDFQKTALVIIDLQKGIVPIDQSGQVVPNAKKLVDKFRKHNGFI 50
|..:||:.|:|||||:|||||||||||:||.||||||||:|.||:..|||
RBAM_033670__ 1 MTTSLNLQFEKTALVLIDLQKGIVPIDKSGTVVPNAKKLIDVFREKGGFI 50
BSNT_05570___ 51 SFVNVAFHDGADALKPQTDEPAQGGSGEMPADWAEFVPEMGVQDGDYTVT 100
|||||.||||||||||.|||.|.|.|.. |||||||||::||::.|||||
RBAM_033670__ 51 SFVNVDFHDGADALKPLTDEEAAGHSAP-PADWAEFVPDIGVKENDYTVT 99
BSNT_05570___ 101 KRQWGAFFGTDLDLQLRRRGIDTIVLCGIATNIGVESTAREAFQLGYQQI 150
|||||||||||||||||||||||||||||||||||||||||||||||||:
RBAM_033670__ 100 KRQWGAFFGTDLDLQLRRRGIDTIVLCGIATNIGVESTAREAFQLGYQQV 149
BSNT_05570___ 151 FITDAMSTFSDEEHEATLRFIFPRIGKSRTTEEFLEQVK 189
|:||||:|||||:|||||:||||:||:|||||||:.|.|
RBAM_033670__ 150 FVTDAMATFSDEQHEATLKFIFPKIGRSRTTEEFIAQTK 188
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