Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05570 and RBAM_033670
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:03
# Commandline: needle
# -asequence dna-align/BSNT_05570___ywoC.1.9828.seq
# -bsequence dna-align/RBAM_033670___ywoC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05570___ywoC-RBAM_033670___ywoC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05570___ywoC-RBAM_033670___ywoC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05570___ywoC
# 2: RBAM_033670___ywoC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 594
# Identity: 431/594 (72.6%)
# Similarity: 431/594 (72.6%)
# Gaps: 51/594 ( 8.6%)
# Score: 1559.5
#
#
#=======================================
BSNT_05570___ 1 ATGATGAATACACTCAACAT---------TG-ATTTTCAAAAAACAGCAT 40
|||| |||||| || |.|||.|||||||.||.|
RBAM_033670__ 1 ---ATGA-------CAACATCATTAAATCTGCAATTTGAAAAAACGGCTT 40
BSNT_05570___ 41 TGGTTATCATTGATTTACAAAAGGGAATTGTGCCGATTGATCAAAGCGG- 89
||||..|.||||||||||||||.||.|||||||||||||||.|||||||
RBAM_033670__ 41 TGGTCCTTATTGATTTACAAAAAGGCATTGTGCCGATTGATAAAAGCGGT 90
BSNT_05570___ 90 -CCAGGTTGTCCCGAACGCGAAAAAGCTCGTAGATAAAT-------TTC- 130
|| |||||.|||||||||||||| ||.||| |||
RBAM_033670__ 91 ACC--GTTGTGCCGAACGCGAAAAA--------ATTAATTGATGTGTTCA 130
BSNT_05570___ 131 -GGAAACATAA--CGGGTTCATCAGCTTTGTAAATGTAGCCTTTCATGAT 177
||||| || |||.||.|||||||||||.||.||.|..||||||||.
RBAM_033670__ 131 GGGAAA---AAGGCGGATTTATCAGCTTTGTGAACGTGGATTTTCATGAC 177
BSNT_05570___ 178 GGAGCGGACGCACTGAAGCCGCAAACGGATGAGCCTGCGCAGGGAGGTTC 227
||||||||.||.||||||||||..||||||||....|||..|||...|||
RBAM_033670__ 178 GGAGCGGATGCGCTGAAGCCGCTGACGGATGAAGAGGCGGCGGGCCATTC 227
BSNT_05570___ 228 AGGGGAAATGCCGGCGGACTGGGCTGAATTTGTTCCGGAAATGGGTGTGC 277
||....||||||||||||||||||||||||.||.||.||.||.|||.
RBAM_033670__ 228 ---GGCTCCGCCGGCGGACTGGGCTGAATTTGTGCCTGACATCGGAGTGA 274
BSNT_05570___ 278 AGGATGGCGATTATACTGTGACAAAACGGCAATGGGGTGCTTTTTTTGGC 327
|.||...|||||||||.||.|||||||||||.|||||.||.|||||.|||
RBAM_033670__ 275 AAGAAAACGATTATACGGTAACAAAACGGCAGTGGGGCGCGTTTTTCGGC 324
BSNT_05570___ 328 ACAGATTTAGACTTGCAGCTGAGACGGCGCGGCATTGATACGATTGTATT 377
||.||..|.|||.|.|||||.|||.|.||.||.||.||.||||||||.||
RBAM_033670__ 325 ACGGACCTGGACCTTCAGCTCAGAAGACGGGGAATCGACACGATTGTGTT 374
BSNT_05570___ 378 GTGCGGCATCGCAACGAATATCGGGGTGGAAAGCACAGCACGGGAGGCAT 427
.|||||.||.||.||.||.|||||.|||||||||||.||.||.||.||.|
RBAM_033670__ 375 ATGCGGGATTGCGACAAACATCGGTGTGGAAAGCACGGCGCGAGAAGCTT 424
BSNT_05570___ 428 TTCAGCTTGGCTATCAGCAGATTTTTATTACAGATGCCATGTCCACATTT 477
|||||||.||.||||||||..||||..|.||.||.||.|||.|.|||||.
RBAM_033670__ 425 TTCAGCTCGGGTATCAGCAAGTTTTCGTAACTGACGCGATGGCGACATTC 474
BSNT_05570___ 478 AGCGATGAAGAGCATGAAGCCACACTGCGCTTTATTTTCCCGAGAATCGG 527
|||||||||.||||.|||||.|||||....|||||.|||||||.||||||
RBAM_033670__ 475 AGCGATGAACAGCACGAAGCGACACTCAAGTTTATCTTCCCGAAAATCGG 524
BSNT_05570___ 528 TA-AATCGCGAACGACGGAAGAGTTTCTGGAACAAGTGAAATGA 570
.| ||.| ||.|||||||||||.|||.|.|.|||....||||||
RBAM_033670__ 525 CAGAAGC-CGGACGACGGAAGAATTTATCGCACAGACAAAATGA 567
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