Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05567 and RBAM_033650
See
DNA alignment /
Visit
BSNT_05567 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:03
# Commandline: needle
# -asequence pep-align/BSNT_05567___ywoE.1.9828.seq
# -bsequence pep-align/RBAM_033650___ywoE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05567___ywoE-RBAM_033650___ywoE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05567___ywoE-RBAM_033650___ywoE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05567___ywoE
# 2: RBAM_033650___ywoE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 490
# Identity: 404/490 (82.4%)
# Similarity: 445/490 (90.8%)
# Gaps: 6/490 ( 1.2%)
# Score: 2176.5
#
#
#=======================================
BSNT_05567___ 1 MKLKESQQQSNRLSNEDLVPLGQEKRTWKAMNFASIWMGCIHNIPTYATV 50
|| :..::||||:||:|||..:|||||:|||||||||||||||||||
RBAM_033650__ 1 MK----KTTNDRLSNKDLLPLGDGERTWKAVNFASIWMGCIHNIPTYATV 46
BSNT_05567___ 51 GGLIAIGLSPWQVLAIIITASLILFGALALNGHAGTKYGLPFPVIIRASY 100
|||||||||||||||||:|||||||.||||||||||||||||||||||||
RBAM_033650__ 47 GGLIAIGLSPWQVLAIIVTASLILFAALALNGHAGTKYGLPFPVIIRASY 96
BSNT_05567___ 101 GIYGANIPALLRAFTAIMWLGIQTFAGSTALNILLLNMWPGWGEIGGEWN 150
|||||||||||||||||||||||||||||||:|||||:|||||.:||:||
RBAM_033650__ 97 GIYGANIPALLRAFTAIMWLGIQTFAGSTALHILLLNIWPGWGNLGGDWN 146
BSNT_05567___ 151 ILGIHLSGLLSFVFFWAIHLLVLHHGMESIKRFEVWAGPLVYLVFGGMVW 200
|||:||.|.|||:|||:||||||.|||||||:||||||||||||||||||
RBAM_033650__ 147 ILGLHLPGFLSFIFFWSIHLLVLRHGMESIKKFEVWAGPLVYLVFGGMVW 196
BSNT_05567___ 201 WAVDIAGGLGPIYSQPGKFHTFSETFWPFAAGVTGIIGIWATLILNIPDF 250
||:||||||||||||||||.||||||||||||||||||||||||||||||
RBAM_033650__ 197 WAIDIAGGLGPIYSQPGKFRTFSETFWPFAAGVTGIIGIWATLILNIPDF 246
BSNT_05567___ 251 TRFAETQKEQIKGQFYGLPGTFALFAFASITVTSGSQVAFGEPIWDVVDI 300
||||.:|||||:||||||||||||||||||||||||||||||||||||:|
RBAM_033650__ 247 TRFAASQKEQIRGQFYGLPGTFALFAFASITVTSGSQVAFGEPIWDVVEI 296
BSNT_05567___ 301 LARFDNPYVIVLSVITLCIATISVNVAANIVSPAYDIANALPKYINFKRG 350
|||||||:||.|||||||||.:||||||||||||||:||.|||||.|:||
RBAM_033650__ 297 LARFDNPFVIALSVITLCIAAVSVNVAANIVSPAYDLANVLPKYITFRRG 346
BSNT_05567___ 351 SFITALLALFTVPWKLMESATSVYAFLGLIGGMLGPVAGVMMADYFIIRK 400
.::.|:|||||:|||||||||:||||||||||||||||||||||||||||
RBAM_033650__ 347 GYLAAVLALFTIPWKLMESATNVYAFLGLIGGMLGPVAGVMMADYFIIRK 396
BSNT_05567___ 401 RELSVDDLYSETGRYVYWKGYNYRAFAATMLGALISLIGMYVPALKSLYD 450
|:|||:|||||||:|.|:|||||||||||.|||.||||||||||...:||
RBAM_033650__ 397 RQLSVEDLYSETGQYTYYKGYNYRAFAATFLGAFISLIGMYVPAFAGIYD 446
BSNT_05567___ 451 ISWFVGVLISFLFYIVLMRVHPPASLAIETVEHAQVSQAE 490
||||.||::|.|.|..||.:|||...|...:...:.::
RBAM_033650__ 447 ISWFAGVILSCLGYTALMYIHPPYVKAAGRIVRERAAE-- 484
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.