Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05567 and RBAM_033650
See
Amino acid alignment /
Visit
BSNT_05567 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:03
# Commandline: needle
# -asequence dna-align/BSNT_05567___ywoE.1.9828.seq
# -bsequence dna-align/RBAM_033650___ywoE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05567___ywoE-RBAM_033650___ywoE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05567___ywoE-RBAM_033650___ywoE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05567___ywoE
# 2: RBAM_033650___ywoE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1497
# Identity: 1102/1497 (73.6%)
# Similarity: 1102/1497 (73.6%)
# Gaps: 66/1497 ( 4.4%)
# Score: 3990.0
#
#
#=======================================
BSNT_05567___ 1 ATGAAATTAAAAGA--GAGTCAGCAGCAATCCAACAGGCTGAGCAATGAA 48
|||||| ||||.| ||.|.|.| ||||.|||||..||
RBAM_033650__ 1 ATGAAA--AAAACAACGAATGATC------------GGCTAAGCAACAAA 36
BSNT_05567___ 49 GATCTGGTGCCTTTGGGACAGGAAAAACGGACGTGGAAAGCAATGAACTT 98
|||.|..|||||||.|||.|.|...|||||||.||||||||..||||.||
RBAM_033650__ 37 GATTTACTGCCTTTAGGAGACGGCGAACGGACATGGAAAGCGGTGAATTT 86
BSNT_05567___ 99 TGCCTCCATTTGGATGGGATGTATACATAACATACCGACCTACGCGACCG 148
|||.|||||.||||||||.|||||.|||||.||.||||||||||||||.|
RBAM_033650__ 87 TGCATCCATCTGGATGGGCTGTATTCATAATATCCCGACCTACGCGACTG 136
BSNT_05567___ 149 TGGGAGGATTAATTGCGATCGGCCTTTCGCCTTGGCAGGTGCTGGCGATC 198
||||.||..|.|||||||||||||||||.||.|||||||||||.||.||.
RBAM_033650__ 137 TGGGCGGGCTCATTGCGATCGGCCTTTCTCCGTGGCAGGTGCTCGCCATT 186
BSNT_05567___ 199 ATTATTACGGCATCACTTATCCTATTTGGCGCTCTTGCTTTAAACGGCCA 248
||..|.|||||.|||||.||..|.||.|.||||.|.||.||.||||||||
RBAM_033650__ 187 ATCGTGACGGCGTCACTGATTTTGTTCGCCGCTTTGGCCTTGAACGGCCA 236
BSNT_05567___ 249 TGCGGGGACAAAATACGGGCTGCCGTTTCCCGTGATCATTCGGGCTTCTT 298
|||.||.||.||||||||.|||||||||||.||.||.||..|||||||||
RBAM_033650__ 237 TGCCGGAACGAAATACGGCCTGCCGTTTCCGGTCATTATCAGGGCTTCTT 286
BSNT_05567___ 299 ACGGGATATACGGCGCGAATATCCCCGCGCTTCTAAGGGCGTTTACAGCT 348
||||.||||||||.||.||.||.||.||||||||.||||||||||||||.
RBAM_033650__ 287 ACGGAATATACGGGGCTAACATTCCGGCGCTTCTCAGGGCGTTTACAGCC 336
BSNT_05567___ 349 ATCATGTGGCTTGGCATCCAGACCTTTGCGGGCAGCACGGCACTGAACAT 398
|||||||||||.||.||.||.||.|||||.||.||||||||..|..||||
RBAM_033650__ 337 ATCATGTGGCTCGGAATTCAAACATTTGCCGGGAGCACGGCTTTACACAT 386
BSNT_05567___ 399 TTTGCTTTTGAATATGTGGCCAGGCTGGGGAGAA-ATTGGCGGCGAGTGG 447
|.||||||||||.||.|||||.|||||||| ||| .|.|||||.||.|||
RBAM_033650__ 387 TCTGCTTTTGAACATATGGCCGGGCTGGGG-GAATCTCGGCGGAGATTGG 435
BSNT_05567___ 448 AACATTCTCGGCATTCACTTGTCCGGTTTGCTTTCCTTTGTATTCTTTTG 497
||.||.|||||..||||..||.|.|||||.||.||.||..|.||||||||
RBAM_033650__ 436 AATATACTCGGGCTTCATCTGCCGGGTTTTCTGTCGTTCATTTTCTTTTG 485
BSNT_05567___ 498 GGCCATTCATTTACTCGTATTGCATCACGGCATGGAGTCGATTAAACGTT 547
|..|||||||.|.||.|||.|||..|||||||||||.||.||.|||...|
RBAM_033650__ 486 GAGCATTCATCTGCTTGTACTGCGGCACGGCATGGAATCAATCAAAAAAT 535
BSNT_05567___ 548 TTGAGGTGTGGGCAGGGCCTTTAGTGTATCTGGTATTTGGCGGCATGGTA 597
||||.||||||||.||.||..|.||.|||||.||.||.|||||||||||.
RBAM_033650__ 536 TTGAAGTGTGGGCGGGCCCGCTTGTTTATCTCGTCTTCGGCGGCATGGTC 585
BSNT_05567___ 598 TGGTGGGCCGTTGATATTGCCGGAGGATTGGGCCCGATATACTCTCAACC 647
||||||||..|.|||||||||||.||..|.||.|||||.|||||.||.||
RBAM_033650__ 586 TGGTGGGCGATAGATATTGCCGGCGGGCTCGGACCGATTTACTCACAGCC 635
BSNT_05567___ 648 AGGAAAGTTTCATACGTTTTCAGAAACATTCTGGCCGTTTGCTGCCGGAG 697
.||||||||.|..||.|||||.|||||.||.|||||||||||.||.||.|
RBAM_033650__ 636 GGGAAAGTTCCGCACCTTTTCTGAAACGTTTTGGCCGTTTGCAGCAGGGG 685
BSNT_05567___ 698 TTACTGGCATCATCGGCATCTGGGCGACATTGATCTTAAATATACCTGAT 747
|.||.|||||.|||||.||.||||||||..|||||.|.|||||.|||||.
RBAM_033650__ 686 TGACGGGCATTATCGGAATATGGGCGACGCTGATCCTGAATATCCCTGAC 735
BSNT_05567___ 748 TTTACACGGTTTGCTGAAACACAAAAAGAGCAAATCAAAGGACAATTTTA 797
||.||.|||||.||.|...|.||||||||.||.||....||.||.|||||
RBAM_033650__ 736 TTCACCCGGTTCGCCGCGTCGCAAAAAGAACAGATTCGCGGCCAGTTTTA 785
BSNT_05567___ 798 CGGCTTGCCGGGAACGTTTGCGCTTTTCGCATTCGCAAGTATTACGGTGA 847
|||..|||||||||||||||||||.|||||.||.|||||.||.|||||||
RBAM_033650__ 786 CGGGCTGCCGGGAACGTTTGCGCTGTTCGCGTTTGCAAGCATCACGGTGA 835
BSNT_05567___ 848 CCTCCGGCTCGCAGGTCGCGTTCGGAGAGCCGATTTGGGATGTTGTCGAT 897
|.|||||.||.||.||.||.||||||||.||||||||||||||.||.||.
RBAM_033650__ 836 CATCCGGATCACAAGTAGCATTCGGAGAACCGATTTGGGATGTGGTGGAG 885
BSNT_05567___ 898 ATTTTGGCGCGGTTTGATAACCCTTATGTCATCG-TCTTGTCCGTGATCA 946
||||||||.|||||||||||.||||.|||.|||| |||| ||.||.||||
RBAM_033650__ 886 ATTTTGGCCCGGTTTGATAATCCTTTTGTTATCGCTCTT-TCGGTCATCA 934
BSNT_05567___ 947 CACTCTGCATCGCCACGATCTCTGTAAATGTCGCGGCGAACATCGTATCG 996
||||.|||||||||.|..||||.||.||.||.|||||.||||||||.||.
RBAM_033650__ 935 CACTTTGCATCGCCGCCGTCTCGGTTAACGTGGCGGCAAACATCGTGTCA 984
BSNT_05567___ 997 CCCGCTTATGATATAGCGAATGCCCTGCCGAAATATATCAATTTCA---- 1042
||.||.|||||..|.|||||||.|||||||||.|||||.|..||||
RBAM_033650__ 985 CCGGCCTATGACTTGGCGAATGTCCTGCCGAAGTATATTACATTCAGGAG 1034
BSNT_05567___ 1043 -------AACGTGGCAGCTTTATCACAGCGTTGCTCGCTTTATTTACGGT 1085
.|..||||.|| |||| .|.|||.|.||.||..|
RBAM_033650__ 1035 GGGAGGGTATTTGGCCGC----------CGTT-TTGGCTCTGTTCACAAT 1073
BSNT_05567___ 1086 TCCATGGAAGCTGATGGAGAGCGCGACAAGCGTGTATGCGTTTCTTGGCT 1135
.||.||||||||||||||||||||.||.|..||.|||||||||||.||..
RBAM_033650__ 1074 ACCGTGGAAGCTGATGGAGAGCGCCACGAATGTTTATGCGTTTCTCGGGC 1123
BSNT_05567___ 1136 TAATAGGCGGCATGCTTGGACCGGTGGCAGGCGTGATGATGGCCGACTAT 1185
|.||.|||||.|||||.|||||||||||.||.|||||||||||.||.|||
RBAM_033650__ 1124 TCATCGGCGGGATGCTCGGACCGGTGGCCGGGGTGATGATGGCTGATTAT 1173
BSNT_05567___ 1186 TTTATCATTCGCAAACGTGAGCTCTCGGTAGATGACCTGTATTCCGAAAC 1235
||||||||..|.|||.|..|||||||.||.||.|||||.|||||.|||||
RBAM_033650__ 1174 TTTATCATCAGAAAAAGGCAGCTCTCAGTTGAAGACCTTTATTCGGAAAC 1223
BSNT_05567___ 1236 AGGACGGTATGTGTATTGGAAGGGCTACAATTACCGTGCGTTTGCAGCCA 1285
.||||.|||....||||..||.|||||.||||||||.||.|||||.||.|
RBAM_033650__ 1224 CGGACAGTACACTTATTACAAAGGCTATAATTACCGGGCCTTTGCCGCGA 1273
BSNT_05567___ 1286 CAATGTTAGGAGCGCTGATTTCGCTGATTGGCATGTATGTTCCTGCATT- 1334
|..|..|.||.|||.|.|||||..|.||.||.|||||.||.||.||.||
RBAM_033650__ 1274 CTTTTCTCGGCGCGTTTATTTCTTTAATCGGGATGTACGTCCCGGCGTTC 1323
BSNT_05567___ 1335 ---GAAAAGCTTATACGATATTTCTTGGTTTGTAGGTGTGCTAATCTCCT 1381
| ||.|.||.|||||.||.|||||||..|||||..|..|.||.|
RBAM_033650__ 1324 GCCG----GCATCTATGATATCTCCTGGTTTGCGGGTGTCATTTTGTCAT 1369
BSNT_05567___ 1382 TTCT--TTTCTACATTGTTCTGATGCGTGTTCACCCGCCTGCATCATTGG 1429
.||| .||.||| .|..||.|||..|.||||.||.||| |..|
RBAM_033650__ 1370 GTCTCGGTTATAC--GGCGCTTATGTATATTCATCCTCCT------TATG 1411
BSNT_05567___ 1430 CAATTGAAACGGTTGAAC--AT-GCGCAGGTCAGCCAGGCTGAATAA 1473
.|| ||.|||..|.|| || |.||.||..||...|||.||||||
RBAM_033650__ 1412 TAA---AAGCGGCGGGACGAATCGTGCGGGAAAGAGCGGCCGAATAA 1455
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.