Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05559 and RBAM_033600

See DNA alignment / Visit BSNT_05559 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:02
# Commandline: needle
#    -asequence pep-align/BSNT_05559___flhO.1.9828.seq
#    -bsequence pep-align/RBAM_033600___flhO.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05559___flhO-RBAM_033600___flhO.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05559___flhO-RBAM_033600___flhO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05559___flhO
# 2: RBAM_033600___flhO
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 270
# Identity:     237/270 (87.8%)
# Similarity:   248/270 (91.9%)
# Gaps:           5/270 ( 1.9%)
# Score: 1185.0
# 
#
#=======================================

BSNT_05559___      1 MLKGLYTATSAMIAQQRRTEMLSNNIANANTSGYKADQGSMRAFPEMLLS     50
                     |||||||||||||.|||||||||||||||||||||.||||:|||||||||
RBAM_033600__      1 MLKGLYTATSAMITQQRRTEMLSNNIANANTSGYKEDQGSIRAFPEMLLS     50

BSNT_05559___     51 RIESKSPAGTSRTEIGSVNTGVYMQELKPLFTQGSLKSTDQPIDIALIEN    100
                     |||     |..:|:|||||||||||||||||||||||:||||.||||:||
RBAM_033600__     51 RIE-----GDKKTKIGSVNTGVYMQELKPLFTQGSLKTTDQPTDIALMEN     95

BSNT_05559___    101 QVPMNAETNENAALFYPVQTADGIRYSKSSTFSLNENNQLTINGRPVLST    150
                     |||.||||||||.||||||||.|:||||||||||||||||||||..||||
RBAM_033600__     96 QVPKNAETNENAELFYPVQTAGGVRYSKSSTFSLNENNQLTINGNLVLST    145

BSNT_05559___    151 DRQPITVDNENFTVSENGTVTTNGRTAGQIDVRMAEDVRNLKRDGNDLYS    200
                     :.||||||||.||||||||||||||.|||||:||.|||||||||||||||
RBAM_033600__    146 NGQPITVDNEKFTVSENGTVTTNGRPAGQIDIRMEEDVRNLKRDGNDLYS    195

BSNT_05559___    201 TADGNDLPSAAGNNQVSYSLKQGVSELSNVDVTSAYTEMTEAYRSFEANQ    250
                     ||||::|||||.|.||||||||||||||||||||.|||||||||||||||
RBAM_033600__    196 TADGSELPSAAANPQVSYSLKQGVSELSNVDVTSTYTEMTEAYRSFEANQ    245

BSNT_05559___    251 KVIQAYDKSMDKAANEIGKI    270
                     |||||||||||||||||||:
RBAM_033600__    246 KVIQAYDKSMDKAANEIGKV    265


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