Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05557 and RBAM_033590

See DNA alignment / Visit BSNT_05557 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:02
# Commandline: needle
#    -asequence pep-align/BSNT_05557___flhP.1.9828.seq
#    -bsequence pep-align/RBAM_033590___flhP.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05557___flhP-RBAM_033590___flhP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05557___flhP-RBAM_033590___flhP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05557___flhP
# 2: RBAM_033590___flhP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 273
# Identity:     183/273 (67.0%)
# Similarity:   218/273 (79.9%)
# Gaps:           4/273 ( 1.5%)
# Score: 922.0
# 
#
#=======================================

BSNT_05557___      1 MLRSMLTASTTLNQLQQQIDTISSNLSNSNTTGYKAKDTNFSELVRQQFD     50
                     ||||||||||.|:|||||:||:|||||||:||||||:|:.||||:|||:|
RBAM_033590__      1 MLRSMLTASTALHQLQQQMDTVSSNLSNSDTTGYKARDSRFSELIRQQYD     50

BSNT_05557___     51 QVDEKNEEVAKARKTPPGLRLGVGAMMNSRLVSDQGSIQKTDRDLDIAFT    100
                     .:|:|.|.....||||||||||.|.:|..:|.|.||||:|||||||||||
RBAM_033590__     51 HIDDKKENSPNMRKTPPGLRLGAGTVMTPQLDSGQGSIKKTDRDLDIAFT    100

BSNT_05557___    101 SPYQYLQVNVNGNRQYTRDGALYVTPSAANANQLQLVTGNGYPVLDENGN    150
                     |||||||...:|.|.|||||:|.:.|:..|...|||:|..|.|:|||||.
RBAM_033590__    101 SPYQYLQAEADGRRVYTRDGSLSLKPAGGNDRLLQLMTAGGNPILDENGQ    150

BSNT_05557___    151 TVNIDSSMKNITINKNGTLTASD--GNAVQRFNLGVVQVNNPQELKSEGN    198
                     .:.||||:..:.|:|.|||||||  |...|.||||:|.|||||.|.:||:
RBAM_033590__    151 PIQIDSSLTQLKISKTGTLTASDQAGTRSQTFNLGIVNVNNPQALHAEGD    200

BSNT_05557___    199 NLFSID--NAAAFEELNGANRQNIGMQQGSLEMSNVDISEQMTDLITSQR    246
                     ||||::  .|:|.|||.|||||.|||:||:||.||||:|::||.||.|||
RBAM_033590__    201 NLFSVNGAGASAIEELTGANRQAIGMEQGALEGSNVDMSKEMTGLIVSQR    250

BSNT_05557___    247 SYQLNSRTITMGDQMLGLINSVR    269
                     ||||||||||:||||||||||||
RBAM_033590__    251 SYQLNSRTITLGDQMLGLINSVR    273


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