Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05555 and RBAM_033580
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:02
# Commandline: needle
# -asequence pep-align/BSNT_05555___rapD.1.9828.seq
# -bsequence pep-align/RBAM_033580___rapD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05555___rapD-RBAM_033580___rapD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05555___rapD-RBAM_033580___rapD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05555___rapD
# 2: RBAM_033580___rapD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 354
# Identity: 231/354 (65.3%)
# Similarity: 280/354 (79.1%)
# Gaps: 0/354 ( 0.0%)
# Score: 1194.0
#
#
#=======================================
BSNT_05555___ 1 MISKFIEKRMLNMLDEWYSAMSKRKMNHVCTLKEKIDQHLPKIKKNTKLW 50
||:||.|||.|.||:|||.||.||:.:...:|.|:|:|||||::||.||.
RBAM_033580__ 1 MIAKFTEKRTLMMLNEWYDAMGKRQFDLARSLHEQINQHLPKLQKNAKLK 50
BSNT_05555___ 51 MRYQLFQARHQLLFENQNGLDSLFDDLYGLEDKMDDELKYYLYFFSGLYE 100
:|||||.||.|||||.::||:.||.:|...:|:||.||.||.|||.||:.
RBAM_033580__ 51 LRYQLFFARFQLLFEKKDGLNKLFCELKRRKDEMDHELTYYFYFFKGLFH 100
BSNT_05555___ 101 MVKTAPKHAVHHFKKAEQYLAAIQNTFEAADLYYQTAGAYYLMKSPPLSI 150
||..||..||..||:|||||.|||:.||||:.||:||||||:||||.|||
RBAM_033580__ 101 MVNGAPNRAVCRFKEAEQYLPAIQDRFEAAEFYYKTAGAYYMMKSPALSI 150
BSNT_05555___ 151 QYVKKALHIYLHQFGYIKKVITCKLLLAVNYIDQERYEKAEQLFKEIIKK 200
|||.|||.||..:.|||||.::|:|||||||||:.||:.|||||.|.||.
RBAM_033580__ 151 QYVNKALEIYQDEAGYIKKTLSCRLLLAVNYIDEARYDDAEQLFNESIKI 200
BSNT_05555___ 201 TQQLHDENLLCHAYYNLGFLKATEKKDQEALLYFRKVLKNQEFEMNSPVS 250
|.:::|.|||||||||.||||..:|||:|||.:::|||.||.||..||||
RBAM_033580__ 201 TDRINDNNLLCHAYYNFGFLKTAQKKDKEALPFYKKVLGNQRFEKESPVS 250
BSNT_05555___ 251 YLHCVYESVRALFKTGNITEAKAVLQKGKELSEKVDIQTIYLKLKTLEAL 300
|||||||:||||||||:..|.:.|||||..:||||..:.:.|||..|..|
RBAM_033580__ 251 YLHCVYEAVRALFKTGSAAEGQTVLQKGLYISEKVQNKIMKLKLTALNIL 300
BSNT_05555___ 301 YTSVEDPYEQLLEYVLELEKIEAWVDLEVLLEDITEYYKKKDDFEKAAFF 350
||:.||||::|.:.||||:||||||||||||:|||:|||||.||||||||
RBAM_033580__ 301 YTAQEDPYDRLQKLVLELQKIEAWVDLEVLLQDITDYYKKKGDFEKAAFF 350
BSNT_05555___ 351 IMRG 354
||||
RBAM_033580__ 351 IMRG 354
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