Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05553 and RBAM_033560

See DNA alignment / Visit BSNT_05553 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:02
# Commandline: needle
#    -asequence pep-align/BSNT_05553.1.9828.seq
#    -bsequence pep-align/RBAM_033560___mscL.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05553-RBAM_033560___mscL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05553-RBAM_033560___mscL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05553
# 2: RBAM_033560___mscL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 155
# Identity:     104/155 (67.1%)
# Similarity:   113/155 (72.9%)
# Gaps:          24/155 (15.5%)
# Score: 508.0
# 
#
#=======================================

BSNT_05553         1 MKKGKWPAAHLSFFLYKYRKAGDCMWNEFKAFAMRGNIVDLAIGVVIGGA     50
                                             ||:|||:|||||||:|||||||||||
RBAM_033560__      1 ------------------------MWSEFKSFAMRGNIMDLAIGVVIGGA     26

BSNT_05553        51 FGKIVTSLVNDIIMPLVGLLLGGLDFSGLSFTFGDAVVKYGSFIQTIVNF    100
                     |||||||||.|||||||||||||||||||:.|||||.:||||||||||||
RBAM_033560__     27 FGKIVTSLVEDIIMPLVGLLLGGLDFSGLAVTFGDAHIKYGSFIQTIVNF     76

BSNT_05553       101 LIISFSIFIVIRTLNGLRRKKEAAEEEAAEEAMDAQEELLKEIRDLLKQQ    150
                     .||||||||||||:..|||||||.||....|..|.|.|||.||||||||:
RBAM_033560__     77 FIISFSIFIVIRTIGKLRRKKEAEEEAEEAEETDQQTELLTEIRDLLKQR    126

BSNT_05553       151 AKSSE    155
                     |..::
RBAM_033560__    127 APHND    131


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