Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05546 and RBAM_033550

See DNA alignment / Visit BSNT_05546 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:02
# Commandline: needle
#    -asequence pep-align/BSNT_05546___ywpF.1.9828.seq
#    -bsequence pep-align/RBAM_033550___ywpF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05546___ywpF-RBAM_033550___ywpF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05546___ywpF-RBAM_033550___ywpF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05546___ywpF
# 2: RBAM_033550___ywpF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 136
# Identity:     109/136 (80.1%)
# Similarity:   125/136 (91.9%)
# Gaps:           0/136 ( 0.0%)
# Score: 565.0
# 
#
#=======================================

BSNT_05546___      1 MKTFKLVDLNVERVDKEEQSIEQFPLIDGLIINKEDGENHWLIEALVQKE     50
                     |||||||||||||:||::|.||||||:||||||||||||||||||||..|
RBAM_033550__      1 MKTFKLVDLNVERLDKDDQPIEQFPLLDGLIINKEDGENHWLIEALVPAE     50

BSNT_05546___     51 HLSFFEQLLNSQSEAKVFVTITKKSNRPAQLTAAVKNIVKLEESIQVLLY    100
                     |||||:.|:.||.|||||||||||||||||||.::||||:||.|||||:|
RBAM_033550__     51 HLSFFDMLMKSQKEAKVFVTITKKSNRPAQLTGSIKNIVELERSIQVLIY    100

BSNT_05546___    101 GQMVTRKQQGTETILESLVKEGYTGTKLIEAFKQKL    136
                     ||||:|...|:|:||||||||||:|::|||||||||
RBAM_033550__    101 GQMVSRNHPGSESILESLVKEGYSGSRLIEAFKQKL    136


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