Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05545 and RBAM_033540
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:02
# Commandline: needle
# -asequence pep-align/BSNT_05545.1.9828.seq
# -bsequence pep-align/RBAM_033540___ywpG.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05545-RBAM_033540___ywpG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05545-RBAM_033540___ywpG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05545
# 2: RBAM_033540___ywpG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 123
# Identity: 37/123 (30.1%)
# Similarity: 50/123 (40.7%)
# Gaps: 61/123 (49.6%)
# Score: 173.5
#
#
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BSNT_05545 1 MNQFRLKEIYI-DGA-PSESHLIQKEVTYMLSRKEVFEVHLNKKGRISFL 48
|||.||||||| ||: ..:.| :|::.:||..|||||::|.:.||
RBAM_033540__ 1 MNQLRLKEIYIEDGSRRKDDH------SYLVCKKEDCEVHLNRRGNVVFL 44
BSNT_05545 49 YETQDGMEQYKIKLSMPEKN------------------------------ 68
|||:|.||||||:||:.:|.
RBAM_033540__ 45 YETKDRMEQYKIQLSLTDKKLSFYWFAWDGGKFVRMFEKDWLKTKLFSRL 94
BSNT_05545 68 ----------------------- 68
RBAM_033540__ 95 LKNTYYISGQKQKFFLSERKTKT 117
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