Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05537 and RBAM_033500

See DNA alignment / Visit BSNT_05537 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:01
# Commandline: needle
#    -asequence pep-align/BSNT_05537___ywqA.1.9828.seq
#    -bsequence pep-align/RBAM_033500___ywqA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05537___ywqA-RBAM_033500___ywqA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05537___ywqA-RBAM_033500___ywqA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05537___ywqA
# 2: RBAM_033500___ywqA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 924
# Identity:     814/924 (88.1%)
# Similarity:   867/924 (93.8%)
# Gaps:           2/924 ( 0.2%)
# Score: 4274.0
# 
#
#=======================================

BSNT_05537___      1 MASLKEILIHVEQMEDGSFTLSAFDENEQPLPYNHMKKHLFQWHESSFYG     50
                     |||||||.||||||||.:||||:.||.||||..:.||.||||||||:|||
RBAM_033500__      1 MASLKEIFIHVEQMEDWTFTLSSHDEKEQPLTLSQMKTHLFQWHESTFYG     50

BSNT_05537___     51 TFLEDVSFIGTTAVLLSPWMTVELLGKNSFNSFSSVQLTEETEPLIEAAS    100
                     |||||||||||.||||||||||||||||||||||:||||:||||||||||
RBAM_033500__     51 TFLEDVSFIGTPAVLLSPWMTVELLGKNSFNSFSTVQLTKETEPLIEAAS    100

BSNT_05537___    101 TIYEFIADGDFLPDYDAWTNGVFRWKDRDNILEGFTAEWFSAAVQDYIQY    150
                     |||||||||||||||:||.|||.|:|||:.:||||||:||||||||||||
RBAM_033500__    101 TIYEFIADGDFLPDYEAWQNGVLRFKDRELLLEGFTADWFSAAVQDYIQY    150

BSNT_05537___    151 DDELREKWEHIKEKSPAVTSFRGHFLDEEDFLEGIGWIDDQSPFTVGLRL    200
                     :|:|.|||..|:.:||||.:|:|.||||:||||||||.||.:||||||||
RBAM_033500__    151 NDDLLEKWRRIETRSPAVHTFKGSFLDEDDFLEGIGWHDDLTPFTVGLRL    200

BSNT_05537___    201 NEPDFDGDDWKIEMFLRDKKSGAVEFFDRLKSLKKSWQAYSDKIAREQDR    250
                     |||||||||||||||||:||:|::.|||.||.|||:|||||.||||||||
RBAM_033500__    201 NEPDFDGDDWKIEMFLREKKTGSITFFDGLKGLKKAWQAYSGKIAREQDR    250

BSNT_05537___    251 FHRTVPWLSFDSGTTLISEEEAWIFLSEASETLVDMGVEILLPSWWQIVR    300
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_033500__    251 FRRTVPWLSFDSGTTLISEEEAWIFLSEASETLVDMGVEILLPSWWQIVR    300

BSNT_05537___    301 DSNMMLKAKVSSSPRGESFVGMNALLDFNWRFATNGIELTEDEFNELVAS    350
                     |||||||||||||||||||||||||||||||||||||||||||||||||:
RBAM_033500__    301 DSNMMLKAKVSSSPRGESFVGMNALLDFNWRFATNGIELTEDEFNELVAN    350

BSNT_05537___    351 NRRLVNIRGQWVKIDPQFIKQMKRLMEKAESEGLHMSDILARELMDQQDG    400
                     |||||||||||||||||||||||:||||||||||||||:|||||||..:.
RBAM_033500__    351 NRRLVNIRGQWVKIDPQFIKQMKKLMEKAESEGLHMSDVLARELMDHGEN    400

BSNT_05537___    401 GLEDSDLIDTSAFAGIQFDLSKQLRSLIRKLTAAENLPEHEVSPSFKGTL    450
                     |.||:|:||:||||||:.:|||||||||||||.|.:|||||||.:|:|.|
RBAM_033500__    401 GAEDTDIIDSSAFAGIKIELSKQLRSLIRKLTDARDLPEHEVSAAFQGQL    450

BSNT_05537___    451 RPYQKYGMNWLLFLRESGFGACLADDMGLGKTIQMIAYFLHVKESGRQKT    500
                     ||||.|||||||||||:||||||||||||||||||||||||||||||||.
RBAM_033500__    451 RPYQMYGMNWLLFLRENGFGACLADDMGLGKTIQMIAYFLHVKESGRQKA    500

BSNT_05537___    501 PHLIIAPTSVLGNWQRELQTFAPDLSVALHYGPRRPKGDDFAAHYENADV    550
                     |.|||||||||||||||||||||.|...||||||||||:.|...|::|||
RBAM_033500__    501 PALIIAPTSVLGNWQRELQTFAPQLKAVLHYGPRRPKGEAFVPAYQDADV    550

BSNT_05537___    551 VLTSYGLSHADTEELSSVTWNTICLDEAQNIKNAHTKQSRAIRKLKGLHH    600
                     |||||||||||.||||||||:||||||||||||||||||||||||||:||
RBAM_033500__    551 VLTSYGLSHADQEELSSVTWSTICLDEAQNIKNAHTKQSRAIRKLKGVHH    600

BSNT_05537___    601 IALSGTPMENRLTELWSIFDFMNKGYLGSLTGFHKRYVLPIEKDRDEKRI    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_033500__    601 IALSGTPMENRLTELWSIFDFMNKGYLGSLTGFHKRYVLPIEKDRDEKRI    650

BSNT_05537___    651 GQLQQLIRPFLLRRTKRDEEVALNLPEKLEEKEFIPLSAEQASLYEQLVK    700
                     .|||||||||||||||||||||||||:|||:|||||||||||||||||||
RBAM_033500__    651 NQLQQLIRPFLLRRTKRDEEVALNLPDKLEQKEFIPLSAEQASLYEQLVK    700

BSNT_05537___    701 DTFDHMTSLTGMQRKALILSMLGRLKQICDHPALYLKEEQTELLAGRSVK    750
                     |||:||.|||||||||||||||||||||||||||||||||||||.|||||
RBAM_033500__    701 DTFEHMASLTGMQRKALILSMLGRLKQICDHPALYLKEEQTELLNGRSVK    750

BSNT_05537___    751 LEKLLELMTAIRAQNESCLIFTQYIQMGNMMKRLLEKTFGEPVQFLNGSL    800
                     |||||:||..||.|.|||||||||||||||||||||||||||||||||||
RBAM_033500__    751 LEKLLDLMAVIRGQGESCLIFTQYIQMGNMMKRLLEKTFGEPVQFLNGSL    800

BSNT_05537___    801 SKQERDTLVEKFQRKEYPTLILSLKAGGTGLNLTAANHVIHYDRWWNPAV    850
                     ||||||:|||:||:||||||||||||||||||||||||||||||||||||
RBAM_033500__    801 SKQERDSLVERFQKKEYPTLILSLKAGGTGLNLTAANHVIHYDRWWNPAV    850

BSNT_05537___    851 ENQATDRAYRIGQERFVHVHKMITTGTIEEKIDVMLESKQTLNDQIIQSE    900
                     |||||||||||||||||||||:|||||||||||.|||:||||||||||||
RBAM_033500__    851 ENQATDRAYRIGQERFVHVHKLITTGTIEEKIDAMLETKQTLNDQIIQSE    900

BSNT_05537___    901 NWITELSTQELEELFTLSATAQ--    922
                     |||||||:.||||||||||:||  
RBAM_033500__    901 NWITELSSAELEELFTLSASAQSH    924


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_05537 and RBAM_033500

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
