Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05536 and RBAM_033490
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:01
# Commandline: needle
# -asequence pep-align/BSNT_05536___ywqB.1.9828.seq
# -bsequence pep-align/RBAM_033490___ywqB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05536___ywqB-RBAM_033490___ywqB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05536___ywqB-RBAM_033490___ywqB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05536___ywqB
# 2: RBAM_033490___ywqB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 536
# Identity: 434/536 (81.0%)
# Similarity: 496/536 (92.5%)
# Gaps: 0/536 ( 0.0%)
# Score: 2342.0
#
#
#=======================================
BSNT_05536___ 1 MLQNMISKDDVLASAEQLKELLPYNEENVQLIKKALILYRQDSVYRLQAV 50
|||:||:|:||||:||||||||||||:||||:||||||||||||||:|..
RBAM_033490__ 1 MLQDMIAKEDVLAAAEQLKELLPYNEDNVQLMKKALILYRQDSVYRIQVQ 50
BSNT_05536___ 51 SPTEVTAYVQDVVPVRVTLNLFVIVKSGCSCPSGRICRHMLAVFLYVYAM 100
:|||::||||||||||||||||.:|||||:|||..||||:|||||||||.
RBAM_033490__ 51 TPTEISAYVQDVVPVRVTLNLFFMVKSGCACPSEAICRHVLAVFLYVYAQ 100
BSNT_05536___ 101 FERVGTFTEYWLEREKLEESKELVRRQFQEKVLPNEESLSSWLAFFDSEF 150
|||||||||:||||||||||:|||||||||||||||||||||||||||||
RBAM_033490__ 101 FERVGTFTEHWLEREKLEESRELVRRQFQEKVLPNEESLSSWLAFFDSEF 150
BSNT_05536___ 151 SLWQARTPEGSQNMQGLYYGYLSALKKHAPNKPELKSLYQIHSAIAVWLR 200
|||:||||.|||.|||||||||||||||.|.|||||||||||||:||||.
RBAM_033490__ 151 SLWEARTPAGSQTMQGLYYGYLSALKKHTPKKPELKSLYQIHSALAVWLH 200
BSNT_05536___ 201 MFTLIEAGKLNPEQDFYSLNPYVEQLMDTIYSSIDKLKTYALSFALDPFL 250
||||||:|:|:.|:|:||:||||||||||||||||:||||||||:|||||
RBAM_033490__ 201 MFTLIESGRLDAEKDYYSINPYVEQLMDTIYSSIDRLKTYALSFSLDPFL 250
BSNT_05536___ 251 DKTPDVIRPLLLKEEIFQYERIRVFGEIWSALLSRPKWVAREQEILKKEA 300
|:||.|:|.||:|||:|||||:|||||:|||||:||||||||||||::|:
RBAM_033490__ 251 DRTPPVLRRLLVKEELFQYERLRVFGEMWSALLNRPKWVAREQEILEQES 300
BSNT_05536___ 301 GRRFSPELQFGRLHLEFLQKNDDVIFAEADQFPPEALPYTFQWLSEMTAK 350
||||||||:||||||.||||:|:.:|.:..:|||||||||||||.|:|||
RBAM_033490__ 301 GRRFSPELRFGRLHLAFLQKDDEAVFQDMSRFPPEALPYTFQWLGELTAK 350
BSNT_05536___ 351 KDWKRLKTWYQQIEPIAMGYTKLDKPFKEIRDVIGELFLLLNAYVQQTND 400
|||||||.||.:|||:|:.||||||||||:||:|||||.||..|.:.:.|
RBAM_033490__ 351 KDWKRLKAWYGRIEPLAVNYTKLDKPFKEMRDIIGELFALLADYARHSRD 400
BSNT_05536___ 401 QALFERFAAGCLPYTFTEYSHHLYEKKRYAEWIEIHSLVGLSINEMDKMM 450
..||||||:|||||||||||.:||||:|||||:|||||||.|:.|::|.:
RBAM_033490__ 401 DQLFERFASGCLPYTFTEYSQYLYEKRRYAEWVEIHSLVGFSVWEIEKDI 450
BSNT_05536___ 451 LKEIAASDPEALIPAYHREVAFFIDQKNRSSYKEAARYLKKLRTLYKKAK 500
||||||||||||||:|||..||||||||||:||||||:||||||||||||
RBAM_033490__ 451 LKEIAASDPEALIPSYHRAAAFFIDQKNRSAYKEAARHLKKLRTLYKKAK 500
BSNT_05536___ 501 KQKVWERYIQLLSSHYKRLRALQEELQKGKLIDGES 536
||:||||||..||:.|||||||||||||||||||||
RBAM_033490__ 501 KQQVWERYISRLSASYKRLRALQEELQKGKLIDGES 536
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