Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05531 and RBAM_033460

See DNA alignment / Visit BSNT_05531 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:00
# Commandline: needle
#    -asequence pep-align/BSNT_05531___ywqE.1.9828.seq
#    -bsequence pep-align/RBAM_033460___ywqE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05531___ywqE-RBAM_033460___ywqE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05531___ywqE-RBAM_033460___ywqE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05531___ywqE
# 2: RBAM_033460___ywqE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 254
# Identity:     163/254 (64.2%)
# Similarity:   201/254 (79.1%)
# Gaps:           0/254 ( 0.0%)
# Score: 846.0
# 
#
#=======================================

BSNT_05531___      1 MIDIHCHILPAMDDGAGDSADSIEMARAAVRQGIRTIIATPHHNNGVYKN     50
                     ||||||||||::||||.|..:|::|||.||||||.||||||||....|..
RBAM_033460__      1 MIDIHCHILPSIDDGAADDTESLKMAREAVRQGIDTIIATPHHVKYRYDT     50

BSNT_05531___     51 EPAAVREAADQLNKRLIKEDIPLHVLPGQEIRIYGEVEQDLAKQQLLSLN    100
                     :...|.||...|||||.||.|||.||||||||..|::...|....|:.|:
RBAM_033460__     51 DRHTVNEAVSLLNKRLNKEGIPLTVLPGQEIRTDGDLLAGLQSGSLVPLH    100

BSNT_05531___    101 DTKHILIEFPFDHVPRYAEQLFYDLQLKGYIPVIAHPERNREIRENPSLL    150
                     :||::|.|||.||||.|||:|||:|||.||:|||||||||||||||||:|
RBAM_033460__    101 NTKYVLAEFPADHVPAYAERLFYELQLNGYVPVIAHPERNREIRENPSVL    150

BSNT_05531___    151 YHLVEKGAASQITSGSLAGTFGKQLKAFSLRLVEANLIHFVASDAHNVKT    200
                     |.||:|||.:|:|:|.:||.||::.|:|||:|:|||||||:||||||:..
RBAM_033460__    151 YSLVKKGAVAQVTAGCIAGAFGRKAKSFSLQLIEANLIHFLASDAHNLGP    200

BSNT_05531___    201 RNFHTQEALYVLEKEFGSELPYMLTENAELLLRNQTIFRQPPQPVKRRKL    250
                     |||:.||||.||:||.|:||.|||||||.||..|:.::::||.||.|||.
RBAM_033460__    201 RNFYYQEALGVLKKEAGAELIYMLTENAALLAENKAVYKEPPLPVARRKR    250

BSNT_05531___    251 FGLF    254
                     :|||
RBAM_033460__    251 WGLF    254


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