Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05524 and RBAM_033430

See DNA alignment / Visit BSNT_05524 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:00
# Commandline: needle
#    -asequence pep-align/BSNT_05524___ywqH.1.9828.seq
#    -bsequence pep-align/RBAM_033430___ywqH.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05524___ywqH-RBAM_033430___ywqH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05524___ywqH-RBAM_033430___ywqH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05524___ywqH
# 2: RBAM_033430___ywqH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 144
# Identity:      61/144 (42.4%)
# Similarity:    96/144 (66.7%)
# Gaps:           4/144 ( 2.8%)
# Score: 298.5
# 
#
#=======================================

BSNT_05524___      1 MGYESMLADIKSSLNGKISDVEDKIEKLKKAKKDIDTLQEEAITEIKEIV     50
                     |.:.|.|:.|.|:::.|:.:||.:|:|||:||::|::||||.::||::|:
RBAM_033430__      1 MSHSSTLSHINSTISHKLGEVEHQIDKLKEAKREIESLQEEGVSEIRDIL     50

BSNT_05524___     51 KPELGKHWTGTKADDFDKGREEAKSEASKIVNDKYNEYMASIQSKIFWLE    100
                     :|.|..|||||.|::||..|::|.:||.:||.|||:.|:..|..|:..||
RBAM_033430__     51 RPHLDHHWTGTFAEEFDDRRDQAHTEAYRIVTDKYDGYIYRIGLKMTQLE    100

BSNT_05524___    101 TEKFELNLTKSAANAAGDLLAKGEDFVEEAGRQISKLK--W-W-    140
                     .||..|...:|.|..|..||..||:.::..|.:|..:|  | | 
RBAM_033430__    101 IEKGGLLAARSIAREAEHLLTLGEEALDTVGEKIQSIKRSWSWF    144


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