Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05522 and RBAM_033420

See DNA alignment / Visit BSNT_05522 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:00
# Commandline: needle
#    -asequence pep-align/BSNT_05522___ywqI.1.9828.seq
#    -bsequence pep-align/RBAM_033420___ywqI.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05522___ywqI-RBAM_033420___ywqI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05522___ywqI-RBAM_033420___ywqI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05522___ywqI
# 2: RBAM_033420___ywqI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 86
# Identity:      60/86 (69.8%)
# Similarity:    68/86 (79.1%)
# Gaps:           0/86 ( 0.0%)
# Score: 297.0
# 
#
#=======================================

BSNT_05522___      1 MSEIKLKYDTVIKTLDSVKDALADVSIGAAGSNGKNKLDYTKKYHEREEN     50
                     |:||||||..|:|.|:||..||..||||.||||||||||||.||..||..
RBAM_033420__      1 MAEIKLKYGAVMKQLESVSSALEAVSIGNAGSNGKNKLDYTSKYQSREAK     50

BSNT_05522___     51 IKTMLGDYKKAVQKNIEDTKDNVDSLKEQDEAIAVK     86
                     :.:|:.:||:||.|||.|.|||||||||||||||||
RBAM_033420__     51 LVSMISEYKQAVHKNIADVKDNVDSLKEQDEAIAVK     86


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