Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05521 and RBAM_033410
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:00
# Commandline: needle
# -asequence pep-align/BSNT_05521.1.9828.seq
# -bsequence pep-align/RBAM_033410___ywqJ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05521-RBAM_033410___ywqJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05521-RBAM_033410___ywqJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05521
# 2: RBAM_033410___ywqJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 584
# Identity: 407/584 (69.7%)
# Similarity: 436/584 (74.7%)
# Gaps: 93/584 (15.9%)
# Score: 2050.5
#
#
#=======================================
BSNT_05521 1 MSKVFESKSLIEEAKSRKKQYETLEEQLNTLKKAFQGVADLGDNFKGKGA 50
|||||||:||.:||..||||||.|||||..||:||||||||||..|||||
RBAM_033410__ 1 MSKVFESQSLTDEADKRKKQYEALEEQLRALKQAFQGVADLGDALKGKGA 50
BSNT_05521 51 DNIKDFFQGQAEIVDSWLTLVSAQIAFLNGISGDIKDQELNDSYVETSFL 100
|||||||||||||.||||||||||||||||||||||||||:|:|||||||
RBAM_033410__ 51 DNIKDFFQGQAEIADSWLTLVSAQIAFLNGISGDIKDQELSDTYVETSFL 100
BSNT_05521 101 DHELPNGDLKASEIVSAHKEEIDSILSGISDIIDLDMYTLDDYADKMGDA 150
:|||||.||||||||||||.|||||||||||||.||.|||||||||||||
RBAM_033410__ 101 EHELPNADLKASEIVSAHKAEIDSILSGISDIIHLDTYTLDDYADKMGDA 150
BSNT_05521 151 QKIRRDTITAVDKLDESLTTEYQNLESLDNAVLTKYSVLMQATSNGKSAS 200
||.|||||||||.||||||.|||||||||||||:||||||||||||||||
RBAM_033410__ 151 QKTRRDTITAVDTLDESLTAEYQNLESLDNAVLSKYSVLMQATSNGKSAS 200
BSNT_05521 201 PMYYDKKAFHSNEVYKSVIEVENQGTTYIDAKTQQAEARRLQEKAEEEAN 250
|||||||||||||:||||...|.|||.|||||.|||||||||||||||||
RBAM_033410__ 201 PMYYDKKAFHSNEIYKSVTATEKQGTDYIDAKAQQAEARRLQEKAEEEAN 250
BSNT_05521 251 KPWYEKTWDGVCNFTGEVTGYYDYKRATEGVDPVTGEKLSTAERVTAGAM 300
||||||||||:||||||||||||||||.||||||||||||||||||||||
RBAM_033410__ 251 KPWYEKTWDGICNFTGEVTGYYDYKRAAEGVDPVTGEKLSTAERVTAGAM 300
BSNT_05521 301 AAAGFIPVVGWAGRAFKGGKAIYKTGKAAIAAEHALDAYKTGKSLDILKM 350
|||||||||||||||||||||||||||..|||||||||||||||||||||
RBAM_033410__ 301 AAAGFIPVVGWAGRAFKGGKAIYKTGKTVIAAEHALDAYKTGKSLDILKM 350
BSNT_05521 351 TEMGAYGLVASNGFSEAVTGRDMFGNKVSEEKRKTGALEAALSLVGAGAL 400
||||||||||||||:|||||||||||||||||||.|||||||||||||||
RBAM_033410__ 351 TEMGAYGLVASNGFTEAVTGRDMFGNKVSEEKRKQGALEAALSLVGAGAL 400
BSNT_05521 401 AKHIDKGIPLATH---SKFQKANKTLEKVKQFKVPTNVRVYAERPVTPEG 447
|||::||||||.. ||.:|..|.|::||:|||||||::...:.|||:|
RBAM_033410__ 401 AKHVNKGIPLAKSPQASKVEKGKKILDQVKEFKVPTNVKIRVHKTVTPDG 450
BSNT_05521 448 FTFGIPTVRVDVEKTAVKDLGIVKMV-----VMAVVREALIVLTFLKITI 492
.:| |.:..||:.|||||||:|||. :..:|:....:..|..:..
RBAM_033410__ 451 ASF--PIIYADVKTTAVKDLGVVKMASGGKGIKGIVKPVSNMNEFFDMEF 498
BSNT_05521 493 K------------------------------------------------- 493
.
RBAM_033410__ 499 GKKISNSLSKSKVKYDGQSIYKVEKKTDNQYLKKGYGVYLDALHKDHLEV 548
BSNT_05521 493 ---------------------------------- 493
RBAM_033410__ 549 IDKTGNVKYVLNLDGTLNPDKTKKALGRVVKGWK 582
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