Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05502 and RBAM_033240
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:59
# Commandline: needle
# -asequence pep-align/BSNT_05502___ywrF.1.9828.seq
# -bsequence pep-align/RBAM_033240___ywrF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05502___ywrF-RBAM_033240___ywrF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05502___ywrF-RBAM_033240___ywrF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05502___ywrF
# 2: RBAM_033240___ywrF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 206
# Identity: 150/206 (72.8%)
# Similarity: 179/206 (86.9%)
# Gaps: 1/206 ( 0.5%)
# Score: 775.0
#
#
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BSNT_05502___ 1 MYIFQADQLSAKDTYKLLSGTVIPRPIAFVTTLSS-EGAVNAAPFSFYNV 49
|:|.:||:|:||||||||||||:|||||||||.|| .|||||||||||||
RBAM_033240__ 1 MHILRADELNAKDTYKLLSGTVVPRPIAFVTTRSSINGAVNAAPFSFYNV 50
BSNT_05502___ 50 VSSDPPLLSISVNRTEGRQKDTARNAVENGEFVVHVSDEAIIEDINETAA 99
||::||||:|||:|.:||||||||||:.:.|||||||||:||||||:|||
RBAM_033240__ 51 VSAEPPLLAISVSRADGRQKDTARNALAHREFVVHVSDESIIEDINKTAA 100
BSNT_05502___ 100 SLRPDESELTRTSLHPVESKAVSVPGIKEARVRFECKLERHITFDNDQGI 149
.|.||.|||..|.|...:|..:||||||||:|||||.||||:.|.||.|.
RBAM_033240__ 101 RLDPDVSELGMTDLSVTDSACISVPGIKEAKVRFECILERHLPFQNDSGE 150
BSNT_05502___ 150 TTADLLIGRVVCFHLDEKVYDAEKGYILTDELKPASRLAGNHYAKLGEEF 199
||.||:|||||||||:::||||:||||.|||||||:|||||.||:||:.:
RBAM_033240__ 151 TTTDLIIGRVVCFHLNDQVYDADKGYIRTDELKPAARLAGNEYARLGKTY 200
BSNT_05502___ 200 TLIRPS 205
||:||:
RBAM_033240__ 201 TLVRPT 206
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