Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05496 and RBAM_033210
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:59
# Commandline: needle
# -asequence pep-align/BSNT_05496___cotB.1.9828.seq
# -bsequence pep-align/RBAM_033210___cotB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05496___cotB-RBAM_033210___cotB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05496___cotB-RBAM_033210___cotB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05496___cotB
# 2: RBAM_033210___cotB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 351
# Identity: 167/351 (47.6%)
# Similarity: 220/351 (62.7%)
# Gaps: 58/351 (16.5%)
# Score: 807.0
#
#
#=======================================
BSNT_05496___ 1 MSKRRMKYHSNDEISYYNFLHSMKDKIVTVYRGGPESKKGKLAAVKSDYI 50
.||..|...:|: ||||:|:.|::||||||||||.|:||.::||||
RBAM_033210__ 1 -MKRNTKRQRSDD----NFLHAMEGKVITVYRGGPESKTGRLADIQSDYI 45
BSNT_05496___ 51 ALQAEKKIIYYQLEHVKSITEDTNNSTTTIETEEMPDADDFHSLIGQLMN 100
|||.:.||:|||.:||||:||:|:.:.:..|..|...||||..||.::.|
RBAM_033210__ 46 ALQVDNKIVYYQWKHVKSVTENTSETVSPAEAAECEKADDFQDLISRMTN 95
BSNT_05496___ 101 QSVQFNQGGPESKKGRLVWLGDDYAALNTNEDGVVYFNIHHIKSISKHEP 150
::||.||||||||:|:|...|||:..|.|.:||:||||..|:||||..:.
RBAM_033210__ 96 RTVQLNQGGPESKRGKLHETGDDFLVLETEDDGIVYFNADHVKSISAEQE 145
BSNT_05496___ 151 DLKIEGQTPSGVLEADYLSEVFKSLTHKWVSINRGGPEAIEGILVDNADG 200
:...|.:.|...: ||....:||.|.|||||||||||||:|||||||:||
RBAM_033210__ 146 EDGQEEERPEFEM-ADDFHGIFKRLIHKWVSINRGGPEAVEGILVDNSDG 194
BSNT_05496___ 201 HYTIVKNQEVLRIYPFHIKSISLGPKGSYKKEDEKNEHQNQEDSDDTDQK 250
|||:||::||||||||||||||.|.||:.|||:.|:| |:..:.:..
RBAM_033210__ 195 HYTLVKDKEVLRIYPFHIKSISEGAKGAAKKEENKDE----ENKGEKESA 240
BSNT_05496___ 251 EEVYSSSLISSKPYSSSSSSKSSKRSSKSSDHRSSTSYSSSGSKSSSKSS 300
|| .||:..|...: ::|||.|
RBAM_033210__ 241 EE--------EKPHEESREEQ----------------------RTSSKKS 260
BSNT_05496___ 301 KRSPRSSDYQSSRSPGYSSSIKSSGKQKE-DYSYETIVRTIDYHWK--RK 347
|||.| |::||.::|| .|||.|::|||||.|| ||
RBAM_033210__ 261 KRSSR--------------SVRSSKREKEVSYSYATVLRTIDYRWKHGRK 296
BSNT_05496___ 348 Y 348
RBAM_033210__ 296 - 296
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