Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05493 and RBAM_033190
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:59
# Commandline: needle
# -asequence pep-align/BSNT_05493___ywrK.1.9828.seq
# -bsequence pep-align/RBAM_033190___ywrK.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05493___ywrK-RBAM_033190___ywrK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05493___ywrK-RBAM_033190___ywrK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05493___ywrK
# 2: RBAM_033190___ywrK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 444
# Identity: 327/444 (73.6%)
# Similarity: 379/444 (85.4%)
# Gaps: 3/444 ( 0.7%)
# Score: 1744.0
#
#
#=======================================
BSNT_05493___ 1 --MLAFFVTMIFIFWRPKGLNEAIPATFGALMVLLCGSVSLADLGEIGTK 48
:::||||:|||||||.|||||:||:.||::|||||:||..|||:||:|
RBAM_033190__ 1 MTLISFFVTIIFIFWRPGGLNEAVPASLGAILVLLCGTVSFHDLGDIGSK 50
BSNT_05493___ 49 VTGASVTILATMIMAIALESFGFFYWVAAKLLQQSKGSGIKLFWLTNLLC 98
|||||:||::||||||||||||||.|.|||||.::|||||:|||||||||
RBAM_033190__ 51 VTGASITIISTMIMAIALESFGFFNWAAAKLLHRAKGSGIRLFWLTNLLC 100
BSNT_05493___ 99 FLMTIFLNNDGSILITTPILLLVLKYLGLKKHQKTPYLLSGVLIATASSA 148
|.||:|||||||:|||||||||||:|||||:|||||||:||||||||:|.
RBAM_033190__ 101 FSMTLFLNNDGSVLITTPILLLVLQYLGLKRHQKTPYLISGVLIATAAST 150
BSNT_05493___ 149 PIGVSNIVNLISLKIIGMDLYLHTAMMFVPSMMGLIFMTCLLFMFFYKRL 198
||||||||||||||:|||||||:|.|||:|..:||:||..|||..||:||
RBAM_033190__ 151 PIGVSNIVNLISLKMIGMDLYLYTNMMFIPGTLGLVFMAFLLFAVFYRRL 200
BSNT_05493___ 199 PKSLPDIPSHFQSLRHRRYHPLHSPSAPLPERNQTKIMLFVLAFVFLVRM 248
||.|||||.||.||.|:|||||..|..| .:.::|.||..|||||..||:
RBAM_033190__ 201 PKQLPDIPVHFDSLEHKRYHPLQPPPDP-TQNSRTNIMFCVLAFVLFVRI 249
BSNT_05493___ 249 SLFAASYTGISVPLVAVIGSFILLSWRWIYFKTSPKDLLYKSPWHIFIFA 298
|||||||.||||.|||||.|.|||.|||.|.|..|.|||.|:||||||||
RBAM_033190__ 250 SLFAASYNGISVSLVAVISSVILLGWRWFYLKIGPADLLRKAPWHIFIFA 299
BSNT_05493___ 299 FTMYVLIYGLHNIGFTELLVNYFEPVVSGSLAHATFASGISTSVFSNLFN 348
||||::||||||||.|.|||...||.||.|:|||....||:|||.|||||
RBAM_033190__ 300 FTMYIIIYGLHNIGLTALLVQSIEPYVSQSIAHAASIMGIATSVLSNLFN 349
BSNT_05493___ 349 NHPALMISTFTLTEMTLNPSTTKIIYLANIIGSDIGSLLLPMGTLATLIW 398
|||||||||.|||||:::|.|.|||||||||||||||||||:||||||||
RBAM_033190__ 350 NHPALMISTLTLTEMSIDPLTVKIIYLANIIGSDIGSLLLPIGTLATLIW 399
BSNT_05493___ 399 MHILKQHDESISWGEYIKTTIIIIPLTVLFTLTCLYFWISWLFL 442
|||::||.|.:||.||||||||::||||:||:|.||.||||::|
RBAM_033190__ 400 MHIIRQHGEKVSWSEYIKTTIIVVPLTVVFTITVLYVWISWIYL 443
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