Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05487 and RBAM_033170

See DNA alignment / Visit BSNT_05487 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:58
# Commandline: needle
#    -asequence pep-align/BSNT_05487___alsS.1.9828.seq
#    -bsequence pep-align/RBAM_033170___alsS.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05487___alsS-RBAM_033170___alsS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05487___alsS-RBAM_033170___alsS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05487___alsS
# 2: RBAM_033170___alsS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 571
# Identity:     481/571 (84.2%)
# Similarity:   526/571 (92.1%)
# Gaps:           0/571 ( 0.0%)
# Score: 2512.0
# 
#
#=======================================

BSNT_05487___      1 MLTKATKEQKSLVKNRGAELVVDCLVEQGVTHVFGIPGAKIDAVFDALQD     50
                     ||.|||.|.|:..|||||||||||||||||||||||||||||||||||:|
RBAM_033170__      1 MLAKATNELKTSEKNRGAELVVDCLVEQGVTHVFGIPGAKIDAVFDALKD     50

BSNT_05487___     51 KGPEIIVARHEQNAAFMAQAVGRLTGKPGVVLVTSGPGASNLATGLLTAN    100
                     ||||:::.||||||||||.|||||||||||.|||||||||||||||||||
RBAM_033170__     51 KGPELVLCRHEQNAAFMAAAVGRLTGKPGVCLVTSGPGASNLATGLLTAN    100

BSNT_05487___    101 TEGDPVVALAGNVIRADRLKRTHQSLDNAALFQPITKYSVEVQDVKNIPE    150
                     |||||||||||||||||||||||||||||||||||||||||||:..||||
RBAM_033170__    101 TEGDPVVALAGNVIRADRLKRTHQSLDNAALFQPITKYSVEVQETGNIPE    150

BSNT_05487___    151 AVTNAFRIASAGQAGAAFVSFPQDVVNEVTNTKNVRAVAAPKLGPAADDA    200
                     |||||||.||||||||||||||||||||:||.||||:|.|||.|||.::|
RBAM_033170__    151 AVTNAFRAASAGQAGAAFVSFPQDVVNEITNVKNVRSVPAPKQGPAPEEA    200

BSNT_05487___    201 ISAAIAKIQTAKLPVVLVGMKGGRPEAIKAVRKLLKKVQLPFVETYQAAG    250
                     :||||||||||||||:|||||||||||:|.:||||.|.:||||||||.||
RBAM_033170__    201 VSAAIAKIQTAKLPVLLVGMKGGRPEAVKQIRKLLAKTKLPFVETYQGAG    250

BSNT_05487___    251 TLSRDLEDQYFGRIGLFRNQPGDLLLEQADVVLTIGYDPIEYDPKFWNVN    300
                     ||||:|||||||||||||||||||||||||||||||||||||||||||||
RBAM_033170__    251 TLSRELEDQYFGRIGLFRNQPGDLLLEQADVVLTIGYDPIEYDPKFWNVN    300

BSNT_05487___    301 GDRTIIHLDEIIADIDHAYQPDLELIGDIPSTINHIEHDAVKVEFAEREQ    350
                     |||.|||||||.|||||||||:|||:|||.:|:..||||||..:...|||
RBAM_033170__    301 GDRAIIHLDEIQADIDHAYQPELELLGDIAATVKQIEHDAVTFDMGSREQ    350

BSNT_05487___    351 KILSDLKQYMHEGEQVPADWKSDRAHPLEIVKELRNAVDDHVTVTCDIGS    400
                     ::||:|||.:.:.|:.|:|.||||.|||:||:|||||:||.|||||||||
RBAM_033170__    351 EVLSELKQMLTDSEKAPSDHKSDRVHPLQIVQELRNAIDDDVTVTCDIGS    400

BSNT_05487___    401 HAIWMSRYFRSYEPLTLMISNGMQTLGVALPWAIGASLVKPGEKVVSVSG    450
                     ||||||||||:||||.|:||||||||||||||||.|:||.||||||||||
RBAM_033170__    401 HAIWMSRYFRAYEPLKLLISNGMQTLGVALPWAIAATLVNPGEKVVSVSG    450

BSNT_05487___    451 DGGFLFSAMELETAVRLKAPIVHIVWNDSTYDMVAFQQLKKYNRTSAVDF    500
                     |||||||||||||||||||||||:||||||||||||||:|||||||.|||
RBAM_033170__    451 DGGFLFSAMELETAVRLKAPIVHLVWNDSTYDMVAFQQMKKYNRTSCVDF    500

BSNT_05487___    501 GNIDIVKYAESFGATGLRVESPDQLADVLRQGMNAEGPVIIDVPVDYSDN    550
                     ||||||||||||||||||||||:||||||::|:|.|||||||:|||||||
RBAM_033170__    501 GNIDIVKYAESFGATGLRVESPEQLADVLQKGLNTEGPVIIDIPVDYSDN    550

BSNT_05487___    551 INLASDKLPKEFGELMKTKAL    571
                     ::|:||.|||:|.|.||.|||
RBAM_033170__    551 VHLSSDMLPKQFKEKMKAKAL    571


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