Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05484 and RBAM_033150
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:58
# Commandline: needle
# -asequence pep-align/BSNT_05484___ywrO.1.9828.seq
# -bsequence pep-align/RBAM_033150___ywrO.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05484___ywrO-RBAM_033150___ywrO.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05484___ywrO-RBAM_033150___ywrO.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05484___ywrO
# 2: RBAM_033150___ywrO
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 178
# Identity: 116/178 (65.2%)
# Similarity: 139/178 (78.1%)
# Gaps: 4/178 ( 2.2%)
# Score: 644.0
#
#
#=======================================
BSNT_05484___ 1 ---MKILVLAVHPHMETSVVNKAWAEELSKHDNITVRDLYKEYPDEAIDV 47
:|:||||:||.|..|.|||||.|||..||.||||:|||||||..||.
RBAM_033150__ 1 MVAVKVLVLAIHPDMNNSAVNKAWTEELKNHDEITVRELYKEYPDGKIDA 50
BSNT_05484___ 48 AKEQQLCEEYDRIVFQFPLYWYSSPPLLKKWQDLVLTYGWAFGSEGNALH 97
.||:||||:||||||||||||||:|||||.|.|.||.||||:||:|.|||
RBAM_033150__ 51 EKERQLCEQYDRIVFQFPLYWYSAPPLLKTWMDHVLAYGWAYGSKGKALH 100
BSNT_05484___ 98 GKEPMLAVSTGSEAEKYQAGGANHYSISELLKPFQATSNLIGMKYLPPYV 147
|||.:||||.|:..:.|||||:||:|:||||:||||.:|..||.|||.:.
RBAM_033150__ 101 GKELLLAVSVGAGEDAYQAGGSNHFSLSELLRPFQAMANFTGMTYLPAFA 150
BSNT_05484___ 148 FYGVNYAAAEDISHSAKRLAEYIQQPFV 175
.|||:.|.|..|..:|||||:||::||
RBAM_033150__ 151 MYGVSSADAAAIRDNAKRLADYIKKPF- 177
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