Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05482 and RBAM_033140
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:58
# Commandline: needle
# -asequence pep-align/BSNT_05482___ywsB.1.9828.seq
# -bsequence pep-align/RBAM_033140___ywsB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05482___ywsB-RBAM_033140___ywsB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05482___ywsB-RBAM_033140___ywsB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05482___ywsB
# 2: RBAM_033140___ywsB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 179
# Identity: 121/179 (67.6%)
# Similarity: 136/179 (76.0%)
# Gaps: 3/179 ( 1.7%)
# Score: 601.5
#
#
#=======================================
BSNT_05482___ 1 MNKPTKLFSTLALAAGMTAATAGGAGTIYAQQPETTVSIDDLYSYPIDSY 50
|.|..|..|.|.||||:|||:|.|...:.....:..|.||||||||:|||
RBAM_033140__ 1 MKKTAKAASILTLAAGITAASAAGITPLPETHAQEAVKIDDLYSYPLDSY 50
BSNT_05482___ 51 LVSAEALNVRTKPSASSQKADTLHLGDSLKLISFSNADWAKVHYKNGKTG 100
||||||||||||.||:|.:|||||||||||::||.|||||||||||||||
RBAM_033140__ 51 LVSAEALNVRTKASAASPRADTLHLGDSLKIVSFQNADWAKVHYKNGKTG 100
BSNT_05482___ 101 FVSTHYIVKAATTVKTKTKTKVYTSADGKSIK-TLPADTSVSFLGWSKTN 149
|||||||||.||||||..|||||| |.:::| :|..:||||||||.||.
RBAM_033140__ 101 FVSTHYIVKEATTVKTTKKTKVYT--DKQAVKASLAKNTSVSFLGWKKTA 148
BSNT_05482___ 150 KGGFDFDWVFVDYGGATGYMKTKDLHMTK 178
.||.||.|..|||||||||:.||||....
RBAM_033140__ 149 GGGIDFGWALVDYGGATGYISTKDLQKLT 177
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